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Lce1f Gene Detail
Summary
  • Symbol
    Lce1f
  • Name
    late cornified envelope 1F
  • Synonyms
    1110055J05Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915078
    NCBI Gene: 67828
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:92718696-92720350 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 40.14 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    50 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915078
protein coding gene Chr3:92718685-92720350 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027512
protein coding gene Chr3:93174009-93176481 (-)
A/J MGP_AJ_G0027479
protein coding gene Chr3:90243261-90245072 (-)
AKR/J MGP_AKRJ_G0027444
protein coding gene Chr3:92352608-92356154 (-)
BALB/cJ MGP_BALBcJ_G0027487
protein coding gene Chr3:90050414-90052079 (-)
C3H/HeJ MGP_C3HHeJ_G0027227
protein coding gene Chr3:92575236-92576931 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027931
protein coding gene Chr3:96720929-96723390 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0025279
protein coding gene Chr3:86873516-86875122 (-)
CAST/EiJ MGP_CASTEiJ_G0026673
protein coding gene Chr3:91995369-91996949 (-)
CBA/J MGP_CBAJ_G0027201
protein coding gene Chr3:100043733-100045398 (-)
DBA/2J MGP_DBA2J_G0027339
protein coding gene Chr3:89570216-89571881 (-)
FVB/NJ MGP_FVBNJ_G0027307
protein coding gene Chr3:87733828-87735493 (-)
LP/J MGP_LPJ_G0027447
protein coding gene Chr3:94391127-94393254 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027332
protein coding gene Chr3:106328079-106329774 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027990
protein coding gene Chr3:92087455-92090552 (-)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0026224
protein coding gene Chr3:90424749-90426154 (-)
WSB/EiJ MGP_WSBEiJ_G0026756
protein coding gene Chr3:92466328-92468023 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    10 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 67828 NCBI Gene Model | MGI Sequence Detail 1655 C57BL/6J ±  kb
    transcript NM_026394 RefSeq | MGI Sequence Detail 768 C57BL/6  
    polypeptide NP_080670 RefSeq | MGI Sequence Detail 147 C57BL/6  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      2 Sequences
    • InterPro Domains
      IPR028205 Late cornified envelope protein
      IPR026075 Small proline-rich protein/late cornified envelope protein
    Molecular
    Reagents
    less
    • All nucleic 7
      cDNA 7

      Microarray probesets 2
    References
    more
    • Summaries
      All 25
      Developmental Gene Expression 1
      Diseases 1
      Gene Ontology 1
      Phenotypes 10
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:236599 Dickinson ME, et al., High-throughput discovery of novel developmental phenotypes. Nature. 2016 Sep 14;537(7621):508-514

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    last database update
    11/26/2019
    MGI 6.14
    The Jackson Laboratory