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1110002E22Rik
Gene Detail
Symbol

Name
ID
1110002E22Rik
RIKEN cDNA 1110002E22 gene
MGI:1915066
Feature Type
protein coding gene
Genetic Map
Chromosome 3
64.05 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr3:138065052-138081506 bp, + strand
From VEGA annotation of GRCm38

  16455 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:131709  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 western clawed frog; 1 zebrafish

Gene Tree: 1110002E22Rik

Human
homologs
Human Homolog LOC285556, uncharacterized LOC285556
NCBI Gene ID 285556
Human Chr (Location)  4q23; chr4:99636529-99822027 (-)  GRCh38
Mutations,
alleles, and
phenotypes
Incidental mutations (data from Mutagenetix , APF )
Interactions
1110002E22Rik interacts with 480 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (13)    Tissues (10)    Images (9)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 13
cDNA source data(4)
External Resources: Expression Atlas
Molecular
reagents
All nucleic(4) cDNA(4)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000035102 (Evidence)
Ensembl Gene ModelENSMUSG00000090066 (Evidence)
Entrez Gene102634333 (Evidence)
DFCITC1613930
DoTSDT.40178872
NIA Mouse Gene IndexU003904
International Mouse Knockout Project Status1110002E22Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000035102 VEGA Gene Model | MGI Sequence Detail 16455 C57BL/6J ±  kb
transcript OTTMUST00000089301 VEGA | MGI Sequence Detail 9741 Not Applicable 
polypeptide OTTMUSP00000048791 VEGA | MGI Sequence Detail 1786 Not Applicable 

For the selected sequences
All sequences(31) RefSeq(12) UniProt(2)
Polymorphisms
SNPs within 2kb(204 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR000286 Histone deacetylase superfamily
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:171050 Thiagarajan RD, et al., Identification of anchor genes during kidney development defines ontological relationships, molecular subcompartments and regulatory pathways. PLoS One. 2011;6(2):e17286
All references(21)
Other
accession IDs
MGI:2139698, MGI:3780463

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory