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1110002E22Rik Gene Detail
Summary
  • Symbol
    1110002E22Rik
  • Name
    RIKEN cDNA 1110002E22 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915066
    NCBI Gene: 102634333
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:138065052-138081506 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 64.05 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    240 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915066
protein coding gene Chr3:138062242-138081506 (.)
129S1/SvImJ MGP_129S1SvImJ_G0027923
protein coding gene Chr3:141108889-141125324 (+)
A/J MGP_AJ_G0027880
protein coding gene Chr3:136112385-136128889 (+)
AKR/J MGP_AKRJ_G0027846
protein coding gene Chr3:139737446-139753921 (+)
BALB/cJ MGP_BALBcJ_G0027892
protein coding gene Chr3:135923237-135939725 (+)
C3H/HeJ MGP_C3HHeJ_G0027622
protein coding gene Chr3:140061721-140078212 (+)
C57BL/6NJ MGP_C57BL6NJ_G0028336
protein coding gene Chr3:145968034-145984488 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025674
protein coding gene Chr3:131217473-131233674 (+)
CAST/EiJ MGP_CASTEiJ_G0027078
protein coding gene Chr3:139831530-139847945 (+)
CBA/J MGP_CBAJ_G0027599
protein coding gene Chr3:150931470-150947979 (+)
DBA/2J MGP_DBA2J_G0027738
protein coding gene Chr3:135236915-135253358 (+)
FVB/NJ MGP_FVBNJ_G0027705
protein coding gene Chr3:132698669-132715108 (+)
LP/J MGP_LPJ_G0027848
protein coding gene Chr3:142507624-142524067 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0027737
protein coding gene Chr3:159035735-159052166 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0028394
protein coding gene Chr3:139275292-139291727 (+)
PWK/PhJ MGP_PWKPhJ_G0026802
protein coding gene Chr3:134989022-135005400 (+)
SPRET/EiJ MGP_SPRETEiJ_G0026629
protein coding gene Chr3:137365059-137381524 (+)
WSB/EiJ MGP_WSBEiJ_G0027157
protein coding gene Chr3:140104873-140121330 (+)



Homology
more
  • Human Ortholog
    C4orf54, chromosome 4 open reading frame 54
  • Vertebrate Orthologs
    9
  • Human Ortholog
    C4orf54, chromosome 4 open reading frame 54
    Orthology source: HomoloGene, HGNC
  • Synonyms
    FOPV
  • Links
    NCBI Gene ID: 285556
    neXtProt AC: NX_D6RIA3
    UniProt: D6RIA3

  • Chr Location
    4q23; chr4:99636529-99657806 (-)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000090066 Ensembl Gene Model | MGI Sequence Detail 16455 C57BL/6J ±  kb
transcript ENSMUST00000163080 Ensembl | MGI Sequence Detail 9741 Not Applicable  
polypeptide ENSMUSP00000123851 Ensembl | MGI Sequence Detail 1786 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR027838 Domain of unknown function DUF4585
    IPR000286 Histone deacetylase family
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 3
Other
Accession IDs
less
MGI:2139698, MGI:3780463
References
more
  • Summaries
    All 20
    Developmental Gene Expression 2
    Diseases 1
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:171050 Thiagarajan RD, et al., Identification of anchor genes during kidney development defines ontological relationships, molecular subcompartments and regulatory pathways. PLoS One. 2011;6(2):e17286

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory