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Ubxn4 Gene Detail
Summary
  • Symbol
    Ubxn4
  • Name
    UBX domain protein 4
  • Synonyms
    1300013G12Rik, Ubxd2
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915062
    NCBI Gene: 67812
  • Gene Overview
    MyGene.info: UBXN4
Location & Maps
more
  • Sequence Map
    Chr1:128243964-128279378 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      35415 bp   ±  kb flank

  • Genome Browsers
Homology
more
  • Human Ortholog
    UBXN4, UBX domain protein 4
  • Vertebrate Orthologs
    10
  • Human Ortholog
    UBXN4, UBX domain protein 4
    Orthology source: HGNC, HomoloGene
  • Synonyms
    erasin, UBXD2, UBXDC1
  • Links
    NCBI Gene ID: 23190
    neXtProt AC: NX_Q92575

  • Chr Location
    2q21.3; chr2:135741619-135785063 (+)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 40962
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 western clawed frog;1 zebrafish
  • HCOP
    human homology predictions: UBXN4
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    17
  • Chemically induced (other)
    2
  • Gene trapped
    12
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    3 involving Ubxn4
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000049358 VEGA Gene Model | MGI Sequence Detail 35415 C57BL/6J ±  kb
transcript OTTMUST00000125824 VEGA | MGI Sequence Detail 4113 Not Applicable  
polypeptide OTTMUSP00000068108 VEGA | MGI Sequence Detail 506 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    236 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 18
    cDNA 18

    Microarray probesets 9
References
more
  • Summaries
    All 28
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 9
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
05/17/2016
MGI 6.03
The Jackson Laboratory