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Limd2 Gene Detail
Summary
  • Symbol
    Limd2
  • Name
    LIM domain containing 2
  • Synonyms
    0610025L06Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915053
    NCBI Gene: 67803
  • Alliance
    gene page
  • Transcription Start Sites
    13 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:106156254-106160729 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 68.89 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    14 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915053
 protein coding gene Chr11:106156254-106160860 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019294
 protein coding gene Chr11:109436214-109440766 (-)
A/J MGP_AJ_G0019262
 protein coding gene Chr11:104780722-104785730 (-)
AKR/J MGP_AKRJ_G0019231
 protein coding gene Chr11:107907695-107912307 (-)
BALB/cJ MGP_BALBcJ_G0019236
 protein coding gene Chr11:105183204-105187734 (-)
C3H/HeJ MGP_C3HHeJ_G0019045
 protein coding gene Chr11:108195057-108199828 (-)
C57BL/6NJ MGP_C57BL6NJ_G0019686
 protein coding gene Chr11:112788911-112793515 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017311
 protein coding gene Chr11:102058604-102063202 (-)
CAST/EiJ MGP_CASTEiJ_G0018598
 protein coding gene Chr11:109252595-109257178 (-)
CBA/J MGP_CBAJ_G0019014
 protein coding gene Chr11:117483463-117490473 (-)
DBA/2J MGP_DBA2J_G0019126
 protein coding gene Chr11:104250615-104255219 (-)
FVB/NJ MGP_FVBNJ_G0019117
 protein coding gene Chr11:103753547-103755608 (-)
LP/J MGP_LPJ_G0019196
 protein coding gene Chr11:109883443-109888047 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0019147
 protein coding gene Chr11:116772324-116777751 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0019723
 protein coding gene Chr11:108395660-108400264 (-)
PWK/PhJ MGP_PWKPhJ_G0018363
 protein coding gene Chr11:105347554-105350122 (-)
SPRET/EiJ MGP_SPRETEiJ_G0018154
 protein coding gene Chr11:108159284-108164103 (-)
WSB/EiJ MGP_WSBEiJ_G0018649
 protein coding gene Chr11:108359363-108363967 (-)



Homology
more
  • Human Ortholog
    LIMD2, LIM domain containing 2
  • Vertebrate Orthologs
    10
  • Human Ortholog
    LIMD2, LIM domain containing 2
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 80774
    neXtProt AC: NX_Q9BT23
    UniProt: Q9BT23

  • Chr Location
    17q23.3; chr17:63695889-63701222 (-)  GRCh38.p7
  • HomoloGene
    Vertebrate Homology Class 12731
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: LIMD2
  • Gene Tree
    Limd2
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    696
  • Tissues
    54
  • cDNA Data
    18
  • Literature Summary
    4
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 67803 NCBI Gene Model | MGI Sequence Detail 4476 C57BL/6J ±  kb
transcript NM_001356458 RefSeq | MGI Sequence Detail 3251 C57BL/6  
polypeptide Q8BGB5 UniProt | EBI | MGI Sequence Detail 128 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 18
    cDNA 18

    Microarray probesets 4
Other
Accession IDs
less
MGI:2144147
References
more
  • Summaries
    All 31
    Developmental Gene Expression 4
    Gene Ontology 2
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:190524 Shalom-Barak T, et al., Placental PPARgamma regulates spatiotemporally diverse genes and a unique metabolic network. Dev Biol. 2012 Dec 1;372(1):143-55
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
05/26/2020
MGI 6.15 		The Jackson Laboratory