About   Help   FAQ
Prpsap1
Gene Detail
Symbol

Name
ID
Prpsap1
phosphoribosyl pyrophosphate synthetase-associated protein 1
MGI:1915013
Synonyms
5730409F23Rik, PAP39
Feature Type
protein coding gene
Genetic Map
Chromosome 11
81.34 cM, cytoband E2
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr11:116470845-116494202 bp, - strand
From VEGA annotation of GRCm38

  23358 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:55687  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: PRPSAP1
Protein SuperFamily: ribose-phosphate pyrophosphokinase catalytic chain
Gene Tree: Prpsap1

Human
homologs
PRPSAP1, phosphoribosyl pyrophosphate synthetase-associated protein 1
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 5635
neXtProt AC: NX_Q14558

Human Synonyms: PAP39

Human Chr (Location): 17q24-q25; chr17:76310787-76354149 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(25) : Gene trapped(24) Targeted(1)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Prpsap1 interacts with 80 markers (Mir17, Mir20a, Mir20b, ...)
Gene Ontology
(GO)
classifications
Expression
cDNA source data(118)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase prpsap1 ; ZFIN prpsap1    NEW 
Molecular
reagents
All nucleic(118) cDNA(118)
Microarray probesets(4)
Other database
links
VEGA Gene Model OTTMUSG00000003898 (Evidence)
Ensembl Gene Model ENSMUSG00000015869 (Evidence)
Entrez Gene 67763 (Evidence)
UniGene 25125
DFCI TC1574926, TC1595785, TC1762330, TC1766749
DoTS DT.110536531, DT.40158758, DT.94365270, DT.94365283, DT.97406892
NIA Mouse Gene Index U033653
Consensus CDS Project CCDS48985.1
International Mouse Phenotyping Consortium Status Prpsap1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000003898 VEGA Gene Model | MGI Sequence Detail 23358 C57BL/6J ±  kb
transcript OTTMUST00000008617 VEGA | MGI Sequence Detail 1841 Not Applicable 
polypeptide OTTMUSP00000004197 VEGA | MGI Sequence Detail 385 Not Applicable 

For the selected sequences
All sequences(77) RefSeq(8) UniProt(5)
Polymorphisms
SNPs within 2kb(129 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR005946 Ribose-phosphate diphosphokinase
Protein Ontology PR:000013294 phosphoribosyl pyrophosphate synthase-associated protein 1
References
(Earliest) J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-le-grand). 1999 Jul;45(5):737-50
(Latest) J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
All references(34)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
08/18/2015
MGI 6.0
The Jackson Laboratory