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Slc38a2
Gene Detail
Symbol

Name
ID
Slc38a2
solute carrier family 38, member 2
MGI:1915010
Synonyms
5033402L14Rik, mKIAA1382
Feature Type
protein coding gene
Genetic Map
Chromosome 15
52.60 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr15:96687394-96699698 bp, - strand
From Ensembl annotation of GRCm38

  12305 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:23132  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Slc38a2

Human
homologs
Human Homolog SLC38A2, solute carrier family 38, member 2
NCBI Gene ID 54407
neXtProt AC  NX_Q96QD8
Human Synonyms  ATA2, PRO1068, SAT2, SNAT2
Human Chr (Location)  12q; chr12:46358188-46372862 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(20) : Gene trapped(16) Radiation induced(1) Targeted(3)
Genomic Mutations involving Slc38a2 (1)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Slc38a2 interacts with 369 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (3 records)
Data Summary: Results (149)    Tissues (27)    Images (25)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 137
RT-PCR 12
cDNA source data(20)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(22) cDNA(20) Primer pair(2)
Microarray probesets(7)
Other database
links
Ensembl Gene ModelENSMUSG00000022462 (Evidence)
Entrez Gene67760 (Evidence)
DFCITC1573038, TC1584689, TC1637155, TC1638856, TC1640427
DoTSDT.101739065, DT.103586760, DT.485942, DT.491675, DT.87048336
NIA Mouse Gene IndexU036597
Consensus CDS ProjectCCDS27778.1
International Mouse Knockout Project StatusSlc38a2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000022462 Ensembl Gene Model | MGI Sequence Detail 12305 C57BL/6J ±  kb
transcript ENSMUST00000023099 Ensembl | MGI Sequence Detail 4626 Not Applicable 
polypeptide ENSMUSP00000023099 Ensembl | MGI Sequence Detail 504 Not Applicable 

For the selected sequences
All sequences(50) RefSeq(4) UniProt(2)
Polymorphisms
SNPs within 2kb(74 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR013057 Amino acid transporter, transmembrane
Protein Ontology PR:000015119 sodium-coupled neutral amino acid transporter 2
References
(Earliest) J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-le-grand). 1999 Jul;45(5):737-50
(Latest) J:176894 Audette MC, et al., Antenatal dexamethasone treatment in midgestation reduces system A-mediated transport in the late-gestation murine placenta. Endocrinology. 2011 Sep;152(9):3561-70
All references(39)
Other
accession IDs
MGI:2145976

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory