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Slc38a2 Gene Detail
Summary
  • Symbol
    Slc38a2
  • Name
    solute carrier family 38, member 2
  • Synonyms
    5033402L14Rik, mKIAA1382
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915010
    NCBI Gene: 67760
  • Gene Overview
    MyGene.info: SLC38A2
  • Alliance
  • Transcription Start Sites
    13 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:96687392-96699724 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 52.60 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    74 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915010
protein coding gene Chr15:96687392-96699730 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022271
protein coding gene Chr15:98288585-98300868 (-)
A/J MGP_AJ_G0022230
protein coding gene Chr15:94434115-94446396 (-)
AKR/J MGP_AKRJ_G0022205
protein coding gene Chr15:97277877-97290159 (-)
BALB/cJ MGP_BALBcJ_G0022236
protein coding gene Chr15:94640690-94652985 (-)
C3H/HeJ MGP_C3HHeJ_G0022006
protein coding gene Chr15:97319044-97331332 (-)
C57BL/6NJ MGP_C57BL6NJ_G0022681
protein coding gene Chr15:101919592-101932026 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020207
protein coding gene Chr15:90421947-90434222 (-)
CAST/EiJ MGP_CASTEiJ_G0021528
protein coding gene Chr15:98200912-98214005 (-)
CBA/J MGP_CBAJ_G0021973
protein coding gene Chr15:105328103-105340393 (-)
DBA/2J MGP_DBA2J_G0022100
protein coding gene Chr15:93872560-93884842 (-)
FVB/NJ MGP_FVBNJ_G0022079
protein coding gene Chr15:92870135-92882429 (-)
LP/J MGP_LPJ_G0022171
protein coding gene Chr15:98410198-98422200 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022099
protein coding gene Chr15:109524175-109536466 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0022696
protein coding gene Chr15:97404183-97416469 (-)
PWK/PhJ MGP_PWKPhJ_G0021269
protein coding gene Chr15:93958855-93971220 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021103
protein coding gene Chr15:97207111-97219429 (-)
WSB/EiJ MGP_WSBEiJ_G0021577
protein coding gene Chr15:97923545-97935810 (-)



Homology
more
  • Human Ortholog
    SLC38A2, solute carrier family 38 member 2
  • Vertebrate Orthologs
    10
  • Human Ortholog
    SLC38A2, solute carrier family 38 member 2
    Orthology source: HomoloGene, HGNC
  • Synonyms
    ATA2, PRO1068, SAT2, SNAT2
  • Links
    NCBI Gene ID: 54407
    neXtProt AC: NX_Q96QD8
    UniProt: Q96QD8

  • Chr Location
    12q13.11; chr12:46358188-46372862 (-)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    31 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 67760 NCBI Gene Model | MGI Sequence Detail 12333 C57BL/6J ±  kb
    transcript NM_175121 RefSeq | MGI Sequence Detail 4658 C57BL/6  
    polypeptide Q8CFE6 UniProt | EBI | MGI Sequence Detail 504 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 23
      cDNA 21
      Primer pair 2

      Microarray probesets 7
    Other
    Accession IDs
    less
    MGI:2145976
    References
    more
    • Summaries
      All 63
      Developmental Gene Expression 3
      Diseases 1
      Gene Ontology 6
      Phenotypes 31
    • Earliest
      J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
    • Latest
      J:255082 Kurogi S, et al., Development of an efficient screening system to identify novel bone metabolism-related genes using the exchangeable gene trap mutagenesis mouse models. Sci Rep. 2017 Jan 20;7:40692

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
    Citing These Resources
    Funding Information
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    last database update
    11/06/2018
    MGI 6.13
    The Jackson Laboratory