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Ttc39d Gene Detail
Summary
  • Symbol
    Ttc39d
  • Name
    tetratricopeptide repeat domain 39D
  • Synonyms
    4930560E09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914987
    NCBI Gene: 67737
Location & Maps
more
  • Sequence Map
    Chr17:80207460-80217936 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      10477 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 50.63 cM, cytoband E3
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    TTC39DP, tetratricopeptide repeat domain 39D, pseudogene
  • Vertebrate Orthologs
    4
  • Human Ortholog
    TTC39DP, tetratricopeptide repeat domain 39D, pseudogene
    Orthology source: HGNC
  • Links
    NCBI Gene ID: 646640

  • Chr Location
    2p22.1; chr2:38763585-38765200 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000033673 VEGA Gene Model | MGI Sequence Detail 10477 C57BL/6J ±  kb
transcript OTTMUST00000084837 VEGA | MGI Sequence Detail 2438 Not Applicable  
polypeptide OTTMUSP00000045766 VEGA | MGI Sequence Detail 604 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    18 from dbSNP Build 142
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR019412 Outer membrane protein Iml2/Tetratricopeptide repeat protein 39
    IPR011990 Tetratricopeptide-like helical domain
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 2
References
more
  • Summaries
    All 17
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/27/2016
MGI 6.05
The Jackson Laboratory