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Itgb3bp
Gene Detail
Symbol

Name
ID
Itgb3bp
integrin beta 3 binding protein (beta3-endonexin)
MGI:1914983
Synonyms
4930471O16Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 4
45.71 cM, cytoband C6
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr4:99765402-99929813 bp, - strand
From VEGA annotation of GRCm38

  164412 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:8617  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken

Protein SuperFamily: nuclear receptor-interacting factor 3
Gene Tree: Itgb3bp

Human
homologs
Human Homolog ITGB3BP, integrin beta 3 binding protein (beta3-endonexin)
NCBI Gene ID 23421
neXtProt AC  NX_Q13352
Human Synonyms  CENPR, CENP-R, HSU37139, NRIF3, TAP20
Human Chr (Location)  1p31.3; chr1:63440770-63523499 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(4) : Gene trapped(4)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Itgb3bp interacts with 291 markers (Mir1b, Mir9-1, Mir9-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (14 annotations)
Process apoptotic process, cell cycle, ...
Component chromosome, chromosome, centromeric region, ...
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (94)    Tissues (94)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 94
cDNA source data(29)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(29) cDNA(29)
Microarray probesets(6)
Other database
links
VEGA Gene ModelOTTMUSG00000007988 (Evidence)
Ensembl Gene ModelENSMUSG00000028549 (Evidence)
Entrez Gene67733 (Evidence)
UniGene257094
NIA Mouse Gene IndexU025294, U138747
Consensus CDS ProjectCCDS18387.1
International Mouse Knockout Project StatusItgb3bp
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000007988 VEGA Gene Model | MGI Sequence Detail 164412 C57BL/6J ±  kb
transcript OTTMUST00000018100 VEGA | MGI Sequence Detail 2806 Not Applicable 
polypeptide OTTMUSP00000008316 VEGA | MGI Sequence Detail 176 Not Applicable 

For the selected sequences
All sequences(41) RefSeq(5) UniProt(2)
Polymorphisms
SNPs within 2kb(799 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR009601 Nuclear receptor co-activator NRIF3
Protein Ontology PR:000009139 centromere protein R
References
(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(32)
Other
accession IDs
MGI:2140468

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory