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Gabarapl1 Gene Detail
Summary
  • Symbol
    Gabarapl1
  • Name
    gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
  • Synonyms
    3110025G09Rik, 9130422N19Rik, Apg8l, Atg8l, GECI
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914980
    NCBI Gene: 57436
Location & Maps
more
  • Sequence Map
    Chr6:129533160-129542346 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      9187 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 63.39 cM
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    GABARAPL1, GABA type A receptor associated protein like 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    GABARAPL1, GABA type A receptor associated protein like 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    APG8L, APG8-LIKE, ATG8, ATG8B, ATG8L, GEC1
  • Links
    NCBI Gene ID: 23710
    neXtProt AC: NX_Q9H0R8

  • Chr Location
    12p13.2; chr12:10212841-10223128 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    2 phenotype references
  • All Mutations and Alleles
    3
  • Endonuclease-mediated
    1
  • Targeted
    2
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000056471 VEGA Gene Model | MGI Sequence Detail 9187 C57BL/6J ±  kb
transcript OTTMUST00000139494 VEGA | MGI Sequence Detail 1820 Not Applicable  
polypeptide OTTMUSP00000073183 VEGA | MGI Sequence Detail 117 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    88 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 299
    cDNA 299

    Microarray probesets 4
Other
Accession IDs
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MGI:1889388, MGI:1890601, MGI:1920405
References
more
  • Summaries
    All 40
    Developmental Gene Expression 2
    Gene Ontology 8
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:184429 Yu Z, et al., Identification of neuroglobin-interacting proteins using yeast two-hybrid screening. Neuroscience. 2012 Jan 3;200:99-105

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/29/2016
MGI 6.06
The Jackson Laboratory