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Atxn7l3b Gene Detail
Summary
  • Symbol
    Atxn7l3b
  • Name
    ataxin 7-like 3B
  • Synonyms
    4921506J03Rik, 6230409E21Rik, ENSMUSG00000074747
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914971
    NCBI Gene: 382423
Location & Maps
more
  • Sequence Map
    Chr10:112925430-112929001 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      3572 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 10, 60.92 cM
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    ATXN7L3B, ataxin 7 like 3B
  • Vertebrate Orthologs
    7
  • Human Ortholog
    ATXN7L3B, ataxin 7 like 3B
    Orthology source: HomoloGene, HGNC
  • Synonyms
    lnc-SCA7
  • Links
    NCBI Gene ID: 552889
    neXtProt AC: NX_Q96GX2

  • Chr Location
    12q21.1; chr12:74537771-74541452 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Genomic Mutations
    1 involving Atxn7l3b
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000035375 VEGA Gene Model | MGI Sequence Detail 3572 C57BL/6J ±  kb
transcript OTTMUST00000090397 VEGA | MGI Sequence Detail 3566 Not Applicable  
polypeptide OTTMUSP00000049583 VEGA | MGI Sequence Detail 97 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    24 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 27
    cDNA 25
    Other 2

    Microarray probesets 8
Other
Accession IDs
less
MGI:1923372, MGI:2143568, MGI:3704370
References
more
  • Summaries
    All 29
    Developmental Gene Expression 4
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/22/2016
MGI 6.06
The Jackson Laboratory