Kirrel3
Gene Detail

Symbol Name ID

Kirrel3 kin of IRRE like 3 (Drosophila) MGI:1914953

Synonyms

1500010O20Rik, 2900036G11Rik, mKIAA1867, Neph2

Feature Type

protein coding gene

Genetic Map

Chromosome 9

18.97 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)

Sequence Map

Chr9:34904913-35036716 bp, + strand From VEGA annotation of GRCm38   131804 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:57050  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Kirrel3

Human homologs

Human Homolog		KIRREL3, kin of IRRE like 3 (Drosophila)
NCBI Gene ID		84623
neXtProt AC		NX_Q8IZU9
Human Synonyms		KIRRE, MRD4, NEPH2, PRO4502
Human Chr (Location)		11q24; chr11:126293396-126870766 (-)  GRCh37.p10
Disease Associations		(1) Diseases Associated with Human KIRREL3

Alleles and phenotypes

All alleles(5) : Targeted(3) Gene trapped(2)

Gene Ontology (GO) classifications

All GO classifications: (13 annotations)

Process	hemopoiesis, neuron migration, ...
Component	axon, dendritic shaft, ...
Function	PDZ domain binding, protein binding

External Resources: FuncBase

Expression

Literature Summary: (8 records)
Data Summary: Results (56)    Tissues (36)   
Theiler Stages: 15, 19, 23, 25, 28

Assay Type	Results
Immunohistochemistry	14
RNA in situ	42

cDNA source data(21)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(22) cDNA(22)
Microarray probesets(4)

Other database links

VEGA Gene Model	OTTMUSG00000016800 (Evidence)
Ensembl Gene Model	ENSMUSG00000032036 (Evidence)
Entrez Gene	67703 (Evidence)
UniGene	220710
DFCI	TC1580202, TC1588386, TC1594001, TC1594006, TC1612424
DoTS	DT.101724295, DT.102544506, DT.102555440, DT.55280491, DT.60118068, DT.87036716, DT.94256843, DT.99853712, DT.99856306
NIA Mouse Gene Index	U010238
Consensus CDS Project	CCDS40574.1, CCDS57667.1
International Mouse Knockout Project Status	Kirrel3

Sequences

Length	Strain/Species
genomic	OTTMUSG00000016800	VEGA Gene Model | MGI Sequence Detail	131804	C57BL/6J
transcript	OTTMUST00000040794	VEGA | MGI Sequence Detail	3795	Not Applicable
polypeptide	OTTMUSP00000018240	VEGA | MGI Sequence Detail	733	Not Applicable

All sequences(53) RefSeq(10) UniProt(5)

Polymorphisms

SNPs(3851 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR013162	CD80-like, immunoglobulin C2-set
InterPro	IPR013098	Immunoglobulin I-set
InterPro	IPR007110	Immunoglobulin-like domain
InterPro	IPR013783	Immunoglobulin-like fold
InterPro	IPR003599	Immunoglobulin subtype
InterPro	IPR003598	Immunoglobulin subtype 2
Protein Ontology	PR:000009343	kin of IRRE-like protein 3

References

(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:188109 Tan SL, et al., Essential roles of the histone methyltransferase ESET in the epigenetic control of neural progenitor cells during development. Development. 2012 Oct;139(20):3806-16
All references(38)

Other accession IDs

MGI:1920101