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Pbdc1 Gene Detail
Summary
  • Symbol
    Pbdc1
  • Name
    polysaccharide biosynthesis domain containing 1
  • Synonyms
    2610029G23Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914933
    NCBI Gene: 67683
  • Gene Overview
    MyGene.info: PBDC1
Location & Maps
more
  • Sequence Map
    ChrX:105079756-105117090 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      37335 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome X, 46.83 cM, cytoband C3
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    PBDC1, polysaccharide biosynthesis domain containing 1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    PBDC1, polysaccharide biosynthesis domain containing 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CXorf26
  • Links
    NCBI Gene ID: 51260
    neXtProt AC: NX_Q9BVG4

  • Chr Location
    Xq13.3; chrX:76172929-76178310 (+)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 9542
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 zebrafish;1 frog, western clawed
  • HCOP
    human homology predictions: PBDC1
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    5
  • Gene trapped
    3
  • Targeted
    2
  • Incidental Mutations
    APF
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000018113 VEGA Gene Model | MGI Sequence Detail 37335 C57BL/6J ±  kb
transcript OTTMUST00000043706 VEGA | MGI Sequence Detail 2638 Not Applicable  
polypeptide OTTMUSP00000019630 VEGA | MGI Sequence Detail 198 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    128 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR021148 Polysaccharide biosynthesis domain
    IPR008476 Protein PBDC1, metazoa/fungi
    IPR023139 Yst0336-like domain
Molecular
Reagents
less
  • All nucleic 54
    cDNA 54

    Microarray probesets 2
References
more
  • Summaries
    All 21
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/13/2016
MGI 6.05
The Jackson Laboratory