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4930524B15Rik Gene Detail
Summary
  • Symbol
    4930524B15Rik
  • Name
    RIKEN cDNA 4930524B15 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914842
    NCBI Gene: 67592
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:31915592-31929651 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 18.71 cM, cytoband A4
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    69 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914842
protein coding gene Chr11:31915554-31929655 (+)
129S1/SvImJ MGP_129S1SvImJ_G0018124
protein coding gene Chr11:30133871-30148501 (+)
A/J MGP_AJ_G0018097
protein coding gene Chr11:29008117-29022143 (+)
AKR/J MGP_AKRJ_G0018061
protein coding gene Chr11:29923600-29940493 (+)
BALB/cJ MGP_BALBcJ_G0018066
protein coding gene Chr11:29198419-29212514 (+)
C3H/HeJ MGP_C3HHeJ_G0017879
protein coding gene Chr11:29867907-29881926 (+)
C57BL/6NJ MGP_C57BL6NJ_G0018518
protein coding gene Chr11:31129206-31146760 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016173
protein coding gene Chr11:27539046-27553292 (+)
CAST/EiJ MGP_CASTEiJ_G0017441
protein coding gene Chr11:29893254-29908121 (+)
CBA/J MGP_CBAJ_G0017852
protein coding gene Chr11:32600094-32615373 (+)
DBA/2J MGP_DBA2J_G0017962
protein coding gene Chr11:28807190-28822005 (+)
FVB/NJ MGP_FVBNJ_G0017956
protein coding gene Chr11:28617024-28631155 (+)
LP/J MGP_LPJ_G0018034
protein coding gene Chr11:30372225-30386294 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0017980
protein coding gene Chr11:33629450-33648772 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018559
protein coding gene Chr11:30042322-30057285 (+)
PWK/PhJ MGP_PWKPhJ_G0017223
protein coding gene Chr11:28945689-28959972 (+)
SPRET/EiJ MGP_SPRETEiJ_G0017017
protein coding gene Chr11:29742577-29757882 (+)
WSB/EiJ MGP_WSBEiJ_G0017493
protein coding gene Chr11:29674710-29691158 (+)



Homology
more
  • Human Ortholog
    C5orf47, chromosome 5 open reading frame 47
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C5orf47, chromosome 5 open reading frame 47
  • Links
    NCBI Gene ID: 133491
    neXtProt AC: NX_Q569G3
    UniProt: Q569G3

  • Chr Location
    5q35.2; chr5:173989159-174007524 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotypes from 2 alleles in 2 genetic backgrounds
    8 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Homozygous knockout does not affect male fertility.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000020299 Ensembl Gene Model | MGI Sequence Detail 14060 C57BL/6J ±  kb
    transcript ENSMUST00000102829 Ensembl | MGI Sequence Detail 2000 Not Applicable  
    polypeptide ENSMUSP00000099893 Ensembl | MGI Sequence Detail 165 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 11
      cDNA 11

      Microarray probesets 3
    References
    more
    • Summaries
      All 27
      Developmental Gene Expression 1
      Phenotypes 8
    • Earliest
      J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
    • Latest
      J:307968 He Y, et al., Single-cell RNA-Seq reveals a highly coordinated transcriptional program in mouse germ cells during primordial follicle formation. Aging Cell. 2021 Jul;20(7):e13424

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.
    last database update
    06/23/2022
    MGI 6.20
    The Jackson Laboratory