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Slc39a9 Gene Detail
Summary
  • Symbol
    Slc39a9
  • Name
    solute carrier family 39 (zinc transporter), member 9
  • Synonyms
    2010002A02Rik, 2610511I23Rik, 4833420E20Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914820
    NCBI Gene: 328133
Location & Maps
more
  • Sequence Map
    Chr12:80644215-80683341 bp, + strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      39127 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 36.91 cM, cytoband D2
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    SLC39A9, solute carrier family 39 member 9
  • Vertebrate Orthologs
    10
  • Human Ortholog
    SLC39A9, solute carrier family 39 member 9
    Orthology source: HomoloGene
  • Synonyms
    ZIP9, ZIP-9
  • Links
    NCBI Gene ID: 55334
    neXtProt AC: NX_Q9NUM3

  • Chr Location
    14q24.1; chr14:69398379-69468403 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    8
  • Chemically induced (other)
    1
  • Gene trapped
    5
  • Targeted
    2
  • Genomic Mutations
    1 involving Slc39a9
  • Incidental Mutations
    APF
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000048833 Ensembl Gene Model | MGI Sequence Detail 39127 C57BL/6J ±  kb
transcript ENSMUST00000085245 Ensembl | MGI Sequence Detail 5229 Not Applicable  
polypeptide ENSMUSP00000082343 Ensembl | MGI Sequence Detail 308 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    197 from dbSNP Build 142
Protein
Information
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  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000015136 zinc transporter ZIP9
  • InterPro Domains
    IPR003689 Zinc/iron permease
Molecular
Reagents
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  • All nucleic 13
    cDNA 12
    Primer pair 1

    Microarray probesets 5
Other
Accession IDs
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MGI:1917080, MGI:1917287, MGI:2145015
References
more
  • Summaries
    All 28
    Developmental Gene Expression 2
    Gene Ontology 2
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/22/2016
MGI 6.04
The Jackson Laboratory