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Gramd3 Gene Detail
Summary
  • Symbol
    Gramd3
  • Name
    GRAM domain containing 3
  • Synonyms
    9030613F08Rik, 9130427A09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914815
    NCBI Gene: 107022
  • Alliance
  • Transcription Start Sites
    11 TSS
Location &
Maps
more
  • Sequence Map
    Chr18:56400337-56503792 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 18, 30.43 cM, cytoband D2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    808 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914815
protein coding gene Chr18:56387485-56503792 (+)
129S1/SvImJ MGP_129S1SvImJ_G0024440
protein coding gene Chr18:55785508-55864704 (+)
A/J MGP_AJ_G0024406
protein coding gene Chr18:53583108-53660189 (+)
AKR/J MGP_AKRJ_G0024376
protein coding gene Chr18:55047324-55122679 (+)
BALB/cJ MGP_BALBcJ_G0024406
protein coding gene Chr18:53771774-53844981 (+)
C3H/HeJ MGP_C3HHeJ_G0024173
protein coding gene Chr18:55271117-55351896 (+)
C57BL/6NJ MGP_C57BL6NJ_G0024852
protein coding gene Chr18:57561507-57639516 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0022284
protein coding gene Chr18:53217806-53297208 (+)
CAST/EiJ MGP_CASTEiJ_G0023647
protein coding gene Chr18:55282627-55363334 (+)
CBA/J MGP_CBAJ_G0024143
protein coding gene Chr18:59360635-59444160 (+)
DBA/2J MGP_DBA2J_G0024273
protein coding gene Chr18:53287000-53360567 (+)
FVB/NJ MGP_FVBNJ_G0024240
protein coding gene Chr18:52674665-52746656 (+)
LP/J MGP_LPJ_G0024358
protein coding gene Chr18:55755689-55835591 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0024270
protein coding gene Chr18:61036365-61121835 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0024899
protein coding gene Chr18:55162312-55247130 (+)
PWK/PhJ MGP_PWKPhJ_G0023391
protein coding gene Chr18:53298383-53371406 (+)
SPRET/EiJ MGP_SPRETEiJ_G0023197
protein coding gene Chr18:55256420-55331054 (+)
WSB/EiJ MGP_WSBEiJ_G0023710
protein coding gene Chr18:55091361-55169473 (+)



Homology
more
  • Human Ortholog
    GRAMD2B, GRAM domain containing 2B
  • Vertebrate Orthologs
    10
  • Human Ortholog
    GRAMD2B, GRAM domain containing 2B
    Orthology source: HomoloGene, HGNC
  • Synonyms
    GRAMD3, NS3TP2
  • Links
    NCBI Gene ID: 65983
    neXtProt AC: NX_Q96HH9
    UniProt: Q96HH9

  • Chr Location
    5q23.2; chr5:126360096-126494377 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000001700 Ensembl Gene Model | MGI Sequence Detail 103456 C57BL/6J ±  kb
transcript ENSMUST00000237422 Ensembl | MGI Sequence Detail 2353 Not Applicable  
polypeptide ENSMUSP00000157609 Ensembl | MGI Sequence Detail 445 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 99
    cDNA 99

    Microarray probesets 7
Other
Accession IDs
less
MGI:1921790, MGI:2147344
References
more
  • Summaries
    All 26
    Gene Ontology 1
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory