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Mgat4d Gene Detail
Summary
  • Symbol
    Mgat4d
  • Name
    MGAT4 family, member C
  • Synonyms
    4933434I20Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914805
    NCBI Gene: 67555
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:83348472-83379402 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 39.84 cM, cytoband C3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    654 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914805
protein coding gene Chr8:83348471-83382320 (.)
129S1/SvImJ MGP_129S1SvImJ_G0033830
protein coding gene Chr8:84150885-84188783 (+)
A/J MGP_AJ_G0033813
protein coding gene Chr8:80866130-80903558 (+)
AKR/J MGP_AKRJ_G0033739
protein coding gene Chr8:83251203-83285892 (+)
BALB/cJ MGP_BALBcJ_G0033806
protein coding gene Chr8:80972245-81007182 (+)
C3H/HeJ MGP_C3HHeJ_G0033515
protein coding gene Chr8:83883745-83918929 (+)
C57BL/6NJ MGP_C57BL6NJ_G0034326
protein coding gene Chr8:87399458-87434667 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0031267
protein coding gene Chr8:74703828-74736955 (+)
CAST/EiJ MGP_CASTEiJ_G0032846
protein coding gene Chr8:83275226-83313268 (+)
CBA/J MGP_CBAJ_G0033494
protein coding gene Chr8:90512668-90560445 (+)
DBA/2J MGP_DBA2J_G0033647
protein coding gene Chr8:80508302-80547319 (+)
FVB/NJ MGP_FVBNJ_G0033592
protein coding gene Chr8:79434204-79466124 (+)
LP/J MGP_LPJ_G0033737
protein coding gene Chr8:84271366-84322099 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0033635
protein coding gene Chr8:93026907-93071387 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0034343
protein coding gene Chr8:83255096-83289045 (+)
PWK/PhJ MGP_PWKPhJ_G0032549
protein coding gene Chr8:79728965-79766353 (+)
SPRET/EiJ MGP_SPRETEiJ_G0032387
protein coding gene Chr8:82053073-82088179 (+)
WSB/EiJ MGP_WSBEiJ_G0032959
protein coding gene Chr8:83638593-83677038 (+)



Homology
more
  • Human Ortholog
    MGAT4D, MGAT4 family member D
  • Vertebrate Orthologs
    7
  • Human Ortholog
    MGAT4D, MGAT4 family member D
    Orthology source: HomoloGene, HGNC
  • Synonyms
    GnT1IP
  • Links
    NCBI Gene ID: 152586
    neXtProt AC: NX_A6NG13
    UniProt: A6NG13

  • Chr Location
    4q31.1; chr4:140442257-140499829 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    34 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 67555 NCBI Gene Model | MGI Sequence Detail 30931 C57BL/6J ±  kb
transcript NM_026233 RefSeq | MGI Sequence Detail 1292 C57BL/6  
polypeptide Q9D4R2 UniProt | EBI | MGI Sequence Detail 373 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    1 Sequence
  • InterPro Domains
    IPR006759 Glycosyl transferase family 54
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 4
References
more
  • Summaries
    All 52
    Gene Ontology 2
    Phenotypes 34
  • Earliest
    J:13049 Gruneberg H, Genetical studies on the skeleton of the mouse. XVIII. Three genes for syndactylism. J Genet. 1956;54:113-145
  • Latest
    J:266142 Grosjean F, et al., Pharmacologic control of oxidative stress and inflammation determines whether diabetic glomerulosclerosis progresses or decreases: A pilot study in sclerosis-prone mice. PLoS One. 2018;13(9):e0204366

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory