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Mgat4d Gene Detail
Summary
  • Symbol
    Mgat4d
  • Name
    MGAT4 family, member C
  • Synonyms
    4933434I20Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914805
    NCBI Gene: 67555
  • Alliance
Location & Maps
more
  • Sequence Map
    Chr8:83348471-83382320 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      33850 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 39.84 cM, cytoband C3
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    MGAT4D, MGAT4 family member D
  • Vertebrate Orthologs
    7
  • Human Ortholog
    MGAT4D, MGAT4 family member D
    Orthology source: HomoloGene, HGNC
  • Synonyms
    GnT1IP
  • Links
    NCBI Gene ID: 152586
    neXtProt AC: NX_A6NG13
    UniProt: A6NG13

  • Chr Location
    4q31.1; chr4:140442257-140499829 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    34 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000024986 VEGA Gene Model | MGI Sequence Detail 33850 C57BL/6J ±  kb
transcript OTTMUST00000061491 VEGA | MGI Sequence Detail 1293 Not Applicable  
polypeptide OTTMUSP00000030173 VEGA | MGI Sequence Detail 373 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    679 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR006759 Glycosyl transferase family 54
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 4
References
more
  • Summaries
    All 53
    Gene Ontology 3
    Phenotypes 34
  • Earliest
    J:13049 Gruneberg H, Genetical studies on the skeleton of the mouse. XVIII. Three genes for syndactylism. J Genet. 1956;54:113-145
  • Latest
    J:236599 Dickinson ME, et al., High-throughput discovery of novel developmental phenotypes. Nature. 2016 Sep 14;537(7621):508-514

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/05/2017
MGI 6.11
The Jackson Laboratory