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Macroh2a3 Pseudogene Detail
Summary
  • Symbol
    Macroh2a3
  • Name
    macroH2A.3 histone
  • Synonyms
    4933432H23Rik, H2afy3
  • Feature Type
    pseudogene
  • IDs
    MGI:1914802
    NCBI Gene: 67552
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:62090070-62091181 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 26.42 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    32 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914802
pseudogene Chr15:62089390-62091300 (-)
129S1/SvImJ MGP_129S1SvImJ_G0011191
pseudogene Chr15:61578110-61579221 (-)
A/J MGP_AJ_G0011181
pseudogene Chr15:59162548-59163659 (-)
AKR/J MGP_AKRJ_G0011141
pseudogene Chr15:60814602-60815713 (-)
BALB/cJ MGP_BALBcJ_G0011148
pseudogene Chr15:59357732-59358843 (-)
C3H/HeJ MGP_C3HHeJ_G0011048
pseudogene Chr15:60946969-60948080 (-)
C57BL/6NJ MGP_C57BL6NJ_G0011446
pseudogene Chr15:63898093-63899204 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0010028
pseudogene Chr15:56239323-56240441 (-)
CAST/EiJ MGP_CASTEiJ_G0010873
pseudogene Chr15:61600633-61603691 (-)
CBA/J MGP_CBAJ_G0011029
pseudogene Chr15:66150808-66151919 (-)
DBA/2J MGP_DBA2J_G0011076
pseudogene Chr15:59035398-59036509 (-)
FVB/NJ MGP_FVBNJ_G0011076
pseudogene Chr15:58082915-58084501 (-)
LP/J MGP_LPJ_G0011167
pseudogene Chr15:61459561-61460672 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0011070
pseudogene Chr15:71129654-71130765 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0011421
pseudogene Chr15:61207267-61208378 (-)
PWK/PhJ MGP_PWKPhJ_G0010745
pseudogene Chr15:59098673-59100439 (-)
SPRET/EiJ MGP_SPRETEiJ_G0010565
pseudogene Chr15:60985773-60986893 (-)
WSB/EiJ MGP_WSBEiJ_G0010918
pseudogene Chr15:61232861-61233972 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    24 phenotype references
  • All Mutations and Alleles
    6
  • Chemically induced (other)
    3
  • Gene trapped
    1
  • Radiation induced
    2
  • Genomic Mutations
    5 involving Macroh2a3
  • Find Mice (IMSR)
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000101167 Ensembl Gene Model | MGI Sequence Detail 1112 C57BL/6J ±  kb
transcript ENSMUST00000151919 Ensembl | MGI Sequence Detail 1112 Not Applicable  
polypeptide Q9D3V6 UniProt | EBI | MGI Sequence Detail 382 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 1
References
more
  • Summaries
    All 39
    Developmental Gene Expression 1
    Diseases 1
    Phenotypes 24
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
01/12/2022
MGI 6.17
The Jackson Laboratory