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Kctd4 Gene Detail
Summary
  • Symbol
    Kctd4
  • Name
    potassium channel tetramerisation domain containing 4
  • Synonyms
    2210017A09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914766
    NCBI Gene: 67516
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:76192443-76202657 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 40.30 cM, cytoband D2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    61 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914766
 protein coding gene Chr14:76192443-76203646 (+)
129S1/SvImJ MGP_129S1SvImJ_G0021577
 protein coding gene Chr14:70835833-70845528 (+)
A/J MGP_AJ_G0021535
 protein coding gene Chr14:69217018-69228136 (+)
AKR/J MGP_AKRJ_G0021512
 protein coding gene Chr14:71285242-71297097 (+)
BALB/cJ MGP_BALBcJ_G0021542
 protein coding gene Chr14:69013458-69023643 (+)
C3H/HeJ MGP_C3HHeJ_G0021319
 protein coding gene Chr14:71000246-71010464 (+)
C57BL/6NJ MGP_C57BL6NJ_G0021982
 protein coding gene Chr14:73944757-73955027 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0019520
 protein coding gene Chr14:66829491-66839760 (+)
CAST/EiJ MGP_CASTEiJ_G0020836
 protein coding gene Chr14:67688816-67699864 (+)
CBA/J MGP_CBAJ_G0021287
 protein coding gene Chr14:76311837-76322321 (+)
DBA/2J MGP_DBA2J_G0021410
 protein coding gene Chr14:68624980-68635180 (+)
FVB/NJ MGP_FVBNJ_G0021388
 protein coding gene Chr14:67965774-67976283 (+)
LP/J MGP_LPJ_G0021480
 protein coding gene Chr14:71994365-72004049 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0021415
 protein coding gene Chr14:75025992-75035699 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0022005
 protein coding gene Chr14:70564270-70573908 (+)
PWK/PhJ MGP_PWKPhJ_G0020579
 protein coding gene Chr14:65367930-65378290 (+)
SPRET/EiJ MGP_SPRETEiJ_G0020416
 protein coding gene Chr14:66531060-66541039 (+)
WSB/EiJ MGP_WSBEiJ_G0020889
 protein coding gene Chr14:70901219-70911343 (+)



Homology
more
  • Human Ortholog
    KCTD4, potassium channel tetramerization domain containing 4
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    KCTD4, potassium channel tetramerization domain containing 4
  • Synonyms
    bA321C24.3
  • Links
    NCBI Gene ID: 386618
    neXtProt AC: NX_Q8WVF5
    UniProt: Q8WVF5

  • Chr Location
    13q14.12-q14.13; chr13:45192853-45201045 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Targeted
    3
  • Genomic Mutations
    1 involving Kctd4
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
    17 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    10
  • Literature Summary
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 67516 NCBI Gene Model | MGI Sequence Detail 10215 C57BL/6J ±  kb
transcript NM_026214 RefSeq | MGI Sequence Detail 3015 C57BL/6  
polypeptide Q9D7X1 UniProt | EBI | MGI Sequence Detail 259 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 9
Other
Accession IDs
less
MGI:2145727
References
more
  • Summaries
    All 31
    Developmental Gene Expression 3
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:336866 Puelles L, et al., The Midbrain Preisthmus: A Poorly Known Effect of the Isthmic Organizer. Int J Mol Sci. 2023 Jun 5;24(11)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory