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Kctd4 Gene Detail
Summary
  • Symbol
    Kctd4
  • Name
    potassium channel tetramerisation domain containing 4
  • Synonyms
    2210017A09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914766
    NCBI Gene: 67516
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:75955003-75965217 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 14, 40.30 cM, cytoband D2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    61 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914766
protein coding gene Chr14:75955003-75966206 (+)
129S1/SvImJ MGP_129S1SvImJ_G0021577
protein coding gene Chr14:70835833-70845528 (+)
A/J MGP_AJ_G0021535
protein coding gene Chr14:69217018-69228136 (+)
AKR/J MGP_AKRJ_G0021512
protein coding gene Chr14:71285242-71297097 (+)
BALB/cJ MGP_BALBcJ_G0021542
protein coding gene Chr14:69013458-69023643 (+)
C3H/HeJ MGP_C3HHeJ_G0021319
protein coding gene Chr14:71000246-71010464 (+)
C57BL/6NJ MGP_C57BL6NJ_G0021982
protein coding gene Chr14:73944757-73955027 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0019520
protein coding gene Chr14:66829491-66839760 (+)
CAST/EiJ MGP_CASTEiJ_G0020836
protein coding gene Chr14:67688816-67699864 (+)
CBA/J MGP_CBAJ_G0021287
protein coding gene Chr14:76311837-76322321 (+)
DBA/2J MGP_DBA2J_G0021410
protein coding gene Chr14:68624980-68635180 (+)
FVB/NJ MGP_FVBNJ_G0021388
protein coding gene Chr14:67965774-67976283 (+)
LP/J MGP_LPJ_G0021480
protein coding gene Chr14:71994365-72004049 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0021415
protein coding gene Chr14:75025992-75035699 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0022005
protein coding gene Chr14:70564270-70573908 (+)
PWK/PhJ MGP_PWKPhJ_G0020579
protein coding gene Chr14:65367930-65378290 (+)
SPRET/EiJ MGP_SPRETEiJ_G0020416
protein coding gene Chr14:66531060-66541039 (+)
WSB/EiJ MGP_WSBEiJ_G0020889
protein coding gene Chr14:70901219-70911343 (+)



Homology
more
  • Human Ortholog
    KCTD4, potassium channel tetramerization domain containing 4
  • Vertebrate Orthologs
    10
  • Human Ortholog
    KCTD4, potassium channel tetramerization domain containing 4
    Orthology source: HomoloGene, HGNC
  • Synonyms
    bA321C24.3
  • Links
    NCBI Gene ID: 386618
    neXtProt AC: NX_Q8WVF5
    UniProt: Q8WVF5

  • Chr Location
    13q14.12-q14.13; chr13:45192853-45201040 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 36441
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: KCTD4
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Targeted
    3
  • Genomic Mutations
    1 involving Kctd4
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 67516 NCBI Gene Model | MGI Sequence Detail 10215 C57BL/6J ±  kb
transcript NM_026214 RefSeq | MGI Sequence Detail 3015 C57BL/6  
polypeptide Q9D7X1 UniProt | EBI | MGI Sequence Detail 259 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 9
Other
Accession IDs
less
MGI:2145727
References
more
  • Summaries
    All 29
    Developmental Gene Expression 2
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:174459 Boyle MP, et al., Cell-type-specific consequences of Reelin deficiency in the mouse neocortex, hippocampus, and amygdala. J Comp Neurol. 2011 Aug 1;519(11):2061-89

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/19/2019
MGI 6.13
The Jackson Laboratory