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Calcoco1 Gene Detail
Summary
  • Symbol
    Calcoco1
  • Name
    calcium binding and coiled coil domain 1
  • Synonyms
    1810009B06Rik, CoCoA, Gcap11
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914738
    NCBI Gene: 67488
  • Gene Overview
    MyGene.info: CALCOCO1
Location & Maps
more
  • Sequence Map
    Chr15:102706779-102722178 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser
  • Download
    Sequence
      15400 bp   ±  kb flank

  • Genome Browsers
    VEGA | Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 57.81 cM, cytoband F3
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    CALCOCO1, calcium binding and coiled-coil domain 1
  • Vertebrate Orthologs
    11
  • Human Ortholog
    CALCOCO1, calcium binding and coiled-coil domain 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    calphoglin, Cocoa, PP13275
  • Links
    NCBI Gene ID: 57658
    neXtProt AC: NX_Q9P1Z2

  • Chr Location
    12q13.13; chr12:53711118-53727523 (-)  GRCh38.p2
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    24 phenotype references
  • All Mutations and Alleles
    9
  • Gene trapped
    1
  • Radiation induced
    2
  • Targeted
    6
  • Genomic Mutations
    2 involving Calcoco1
  • Incidental Mutations
    Mutagenetix , APF , CvDC
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    27
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    7
  • Tissues
    3
  • cDNA Data
    81
  • Literature Summary
    2
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000035802 VEGA Gene Model | MGI Sequence Detail 15400 C57BL/6J ±  kb
transcript OTTMUST00000091678 VEGA | MGI Sequence Detail 2822 Not Applicable  
polypeptide OTTMUSP00000050516 VEGA | MGI Sequence Detail 691 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    81 from dbSNP Build 142
Protein
Information
less
  • UniProt
    3 Sequences
  • Protein Ontology
    PR:000004970 calcium-binding and coiled-coil domain-containing protein 1
  • InterPro Domains
    IPR012852 Calcium binding and coiled-coil domain-like
Molecular
Reagents
less
  • All nucleic 82
    cDNA 82

    Microarray probesets 3
Other
Accession IDs
less
MGD-MRK-18684, MGI:101860
References
more
  • Summaries
    All 33
    Developmental Gene Expression 2
    Diseases 1
    Gene Ontology 5
    Phenotypes 24
  • Earliest
    J:19885 Kambouris M, et al., Novel cDNA clones obtained by antibody screening of a mouse cerebellar cDNA expression library. Brain Res Mol Brain Res. 1994 Sep;25(3-4):183-91
  • Latest
    J:215727 Mizuta S, et al., CCAR1/CoCoA pair-mediated recruitment of the Mediator defines a novel pathway for GATA1 function. Genes Cells. 2014 Jan;19(1):28-51
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/27/2016
MGI 6.05 		The Jackson Laboratory