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Snap29
Gene Detail
Symbol

Name
ID
Snap29
synaptosomal-associated protein 29
MGI:1914724
Synonyms
1300018G05Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 16
10.79 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr16:17406003-17430826 bp, + strand
From VEGA annotation of GRCm38

  24824 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:3512  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Protein SuperFamily: synaptosomal-associated protein 29
Gene Tree: Snap29

Human
homologs
Human Homolog SNAP29, synaptosomal-associated protein, 29kDa
NCBI Gene ID 9342
neXtProt AC  NX_O95721
Human Synonyms  CEDNIK, SNAP-29
Human Chr (Location)  22q11.21; chr22:20859004-20891214 (+)  GRCh38
Disease Associations  (1) Diseases Associated with Human SNAP29
Mutations,
alleles, and
phenotypes
All mutations/alleles(9) : Gene trapped(6) Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Snap29 interacts with 296 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (19 annotations)
Process autophagic vacuole fusion, autophagy, ...
Component cell junction, centrosome, ...
Function SNAP receptor activity, syntaxin binding
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (57)    Tissues (13)    Images (23)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 56
Western blot 1
cDNA source data(52)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(52) cDNA(52)
Microarray probesets(6)
Other database
links
VEGA Gene ModelOTTMUSG00000023704 (Evidence)
Ensembl Gene ModelENSMUSG00000022765 (Evidence)
Entrez Gene67474 (Evidence)
UniGene271992
DFCITC1575029, TC1730688
NIA Mouse Gene IndexU016871
Consensus CDS ProjectCCDS28001.1
International Mouse Knockout Project StatusSnap29
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000023704 VEGA Gene Model | MGI Sequence Detail 24824 C57BL/6J ±  kb
transcript OTTMUST00000057883 VEGA | MGI Sequence Detail 3429 Not Applicable 
polypeptide OTTMUSP00000027987 VEGA | MGI Sequence Detail 260 Not Applicable 

For the selected sequences
All sequences(29) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(39 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR000928 SNAP-25
InterPro IPR000727 Target SNARE coiled-coil domain
Protein Ontology PR:000015313 synaptosomal-associated protein 29
References
(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(40)
Other
accession IDs
MGI:2146517, MGI:2146557, MGI:2146684

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory