About   Help   FAQ
Snap29
Gene Detail
Symbol

Name
ID
Snap29
synaptosomal-associated protein 29
MGI:1914724
Synonyms
1300018G05Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 16
10.79 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr16:17406003-17430826 bp, + strand
From VEGA annotation of GRCm38

  24824 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:3512  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: SNAP29
Protein SuperFamily: synaptosomal-associated protein 29
Gene Tree: Snap29

Human
homologs
SNAP29, synaptosomal-associated protein, 29kDa
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 9342
neXtProt AC: NX_O95721

Human Synonyms: CEDNIK, SNAP-29

Human Chr (Location): 22q11.21; chr22:20859004-20891214 (+)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human SNAP29

Mutations,
alleles, and
phenotypes
All mutations/alleles(10) : Gene trapped(6) Targeted(4)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Snap29 interacts with 295 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (18 annotations)
Process autophagy, exocytosis, ...
Component centrosome, cytoplasm, ...
Function SNAP receptor activity, syntaxin binding
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (57)    Tissues (13)    Images (23)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 56
Western blot 1
cDNA source data(52)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase snap29 ; ZFIN snap29    NEW 
Molecular
reagents
All nucleic(52) cDNA(52)
Microarray probesets(6)
Other database
links
VEGA Gene Model OTTMUSG00000023704 (Evidence)
Ensembl Gene Model ENSMUSG00000022765 (Evidence)
Entrez Gene 67474 (Evidence)
UniGene 271992
DFCI TC1575029, TC1730688
NIA Mouse Gene Index U016871
Consensus CDS Project CCDS28001.1
International Mouse Phenotyping Consortium Status Snap29
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000023704 VEGA Gene Model | MGI Sequence Detail 24824 C57BL/6J ±  kb
transcript OTTMUST00000057883 VEGA | MGI Sequence Detail 3429 Not Applicable 
polypeptide OTTMUSP00000027987 VEGA | MGI Sequence Detail 260 Not Applicable 

For the selected sequences
All sequences(29) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(39 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR000928 SNAP-25
InterPro IPR000727 Target SNARE coiled-coil domain
Protein Ontology PR:000015313 synaptosomal-associated protein 29
References
(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:217856 Corradini I, et al., Epileptiform activity and cognitive deficits in SNAP-25(+/-) mice are normalized by antiepileptic drugs. Cereb Cortex. 2014 Feb;24(2):364-76
All references(41)
Other
accession IDs
MGI:2146517, MGI:2146557, MGI:2146684

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
07/21/2015
MGI 5.22
The Jackson Laboratory