Snap29
Gene Detail

Symbol Name ID

Snap29 synaptosomal-associated protein 29 MGI:1914724

Synonyms

1300018G05Rik

Feature Type

protein coding gene

Genetic Map

Chromosome 16

10.79 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)

Sequence Map

Chr16:17406003-17430826 bp, + strand From VEGA annotation of GRCm38   24824 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:3512  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Protein SuperFamily: synaptosomal-associated protein 29
Gene Tree: Snap29

Human homologs

Human Homolog		SNAP29, synaptosomal-associated protein, 29kDa
NCBI Gene ID		9342
neXtProt AC		NX_O95721
Human Synonyms		CEDNIK, SNAP-29
Human Chr (Location)		22q11.21; chr22:21213292-21245502 (+)  GRCh37.p10
Disease Associations		(1) Diseases Associated with Human SNAP29

Alleles and phenotypes

All alleles(9) : Targeted(3) Gene trapped(6)

Gene Ontology (GO) classifications

All GO classifications: (11 annotations)

Process	autophagic vacuole fusion, protein transport, ...
Component	cell junction, cytoplasm, ...
Function	syntaxin binding

External Resources: FuncBase

Expression

Literature Summary: (2 records)
Data Summary: Results (57)    Tissues (13)    Images (23)
Theiler Stages: 23, 28

Assay Type	Results
RNA in situ	56
Western blot	1

cDNA source data(52)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(52) cDNA(52)
Microarray probesets(6)

Other database links

VEGA Gene Model	OTTMUSG00000023704 (Evidence)
Ensembl Gene Model	ENSMUSG00000022765 (Evidence)
Entrez Gene	67474 (Evidence)
UniGene	271992
DFCI	TC1575029, TC1730688
NIA Mouse Gene Index	U016871
Consensus CDS Project	CCDS28001.1
International Mouse Knockout Project Status	Snap29

Sequences

Length	Strain/Species
genomic	OTTMUSG00000023704	VEGA Gene Model | MGI Sequence Detail	24824	C57BL/6J
transcript	OTTMUST00000057883	VEGA | MGI Sequence Detail	3429	Not Applicable
polypeptide	OTTMUSP00000027987	VEGA | MGI Sequence Detail	260	Not Applicable

All sequences(29) RefSeq(2) UniProt(1)

Polymorphisms

SNPs(33 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR000928	SNAP-25
InterPro	IPR000727	Target SNARE coiled-coil domain
Protein Ontology	PR:000015313	synaptosomal-associated protein 29

References

(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(38)

Other accession IDs

MGI:2146517, MGI:2146557, MGI:2146684