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Abhd5 Gene Detail
Summary
  • Symbol
    Abhd5
  • Name
    abhydrolase domain containing 5
  • Synonyms
    1300003D03Rik, 2010002J10Rik, CGI-58, IECN5, NCIE2
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914719
    NCBI Gene: 67469
  • Gene Overview
    MyGene.info: ABHD5
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:122351608-122381524 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 73.03 cM, cytoband F4
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    108 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914719
protein coding gene Chr9:122351539-122381524 (.)
129S1/SvImJ MGP_129S1SvImJ_G0035460
protein coding gene Chr9:125337301-125367958 (+)
A/J MGP_AJ_G0035441
protein coding gene Chr9:120551765-120583041 (+)
AKR/J MGP_AKRJ_G0035374
protein coding gene Chr9:123783988-123816315 (+)
BALB/cJ MGP_BALBcJ_G0035437
protein coding gene Chr9:120469566-120501940 (+)
C3H/HeJ MGP_C3HHeJ_G0035144
protein coding gene Chr9:124234604-124264424 (+)
C57BL/6NJ MGP_C57BL6NJ_G0035960
protein coding gene Chr9:128783234-128812627 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0032842
protein coding gene Chr9:117704953-117731000 (+)
CAST/EiJ MGP_CASTEiJ_G0034449
protein coding gene Chr9:124263699-124291958 (+)
CBA/J MGP_CBAJ_G0035112
protein coding gene Chr9:133501287-133535117 (+)
DBA/2J MGP_DBA2J_G0035271
protein coding gene Chr9:120005465-120034627 (+)
FVB/NJ MGP_FVBNJ_G0035218
protein coding gene Chr9:118925623-118955473 (+)
LP/J MGP_LPJ_G0035350
protein coding gene Chr9:125673891-125706938 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035259
protein coding gene Chr9:134365617-134396147 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0035979
protein coding gene Chr9:124223504-124254957 (+)
PWK/PhJ MGP_PWKPhJ_G0034153
protein coding gene Chr9:120460350-120487450 (+)
SPRET/EiJ MGP_SPRETEiJ_G0033990
protein coding gene Chr9:124335808-124369855 (+)
WSB/EiJ MGP_WSBEiJ_G0034569
protein coding gene Chr9:124080718-124107682 (+)



Homology
more
  • Human Ortholog
    ABHD5, abhydrolase domain containing 5
  • Vertebrate Orthologs
    10
  • Human Ortholog
    ABHD5, abhydrolase domain containing 5
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CGI58, IECN2, NCIE2
  • Links
    NCBI Gene ID: 51099
    neXtProt AC: NX_Q8WTS1
    UniProt: Q8WTS1

  • Chr Location
    3p21.33; chr3:43690883-43722725 (+)  GRCh38.p7

Human Diseases
more
  • Diseases
    1 with Abhd5 mouse models; 1 with human ABHD5 associations

Human Disease Mouse Models
      
IDs
View 1 model
Click on a disease name to see all genes associated with that disease.

  • Mutations/Alleles
    1 with disease annotations
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    59 phenotypes from 5 alleles in 6 genetic backgrounds
    5 images
    16 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-out allele exhibit growth retardation, impaired triacylglycerol catabolism, hepatic steatosis, and lethal skin barrier defect.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000032540 Ensembl Gene Model | MGI Sequence Detail 29917 C57BL/6J ±  kb
    transcript ENSMUST00000156520 Ensembl | MGI Sequence Detail 3157 Not Applicable  
    polypeptide ENSMUSP00000122274 Ensembl | MGI Sequence Detail 351 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 14
      cDNA 14

      Microarray probesets 4
    Other
    Accession IDs
    less
    MGI:1917092
    References
    more
    • Summaries
      All 69
      Developmental Gene Expression 5
      Diseases 1
      Gene Ontology 12
      Phenotypes 16
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:256766 Shin H, et al., Lipolysis in Brown Adipocytes Is Not Essential for Cold-Induced Thermogenesis in Mice. Cell Metab. 2017 Nov 7;26(5):764-777.e5

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
    Citing These Resources
    Funding Information
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    last database update
    11/06/2018
    MGI 6.13
    The Jackson Laboratory