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Pdcl
Gene Detail
 Symbol
Name
ID
Pdcl
phosducin-like
MGI:1914716
Synonyms 1200011E13Rik, PhLP1
Feature Type protein coding gene
Genetic Map
Chromosome 2
24.19 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr2:37350074-37359332 bp, - strand
From VEGA annotation of GRCm38

  9259 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:38043  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Protein SuperFamily: phosducin
Gene Tree: Pdcl

Human
homologs
Human Homolog PDCL, phosducin-like
NCBI Gene ID 5082
neXtProt AC  NX_Q13371
Human Synonyms  PhLP
Human Chr (Location)  9q12-q13; chr9:122818097-122828656 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(4) : Gene trapped(1) Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Pdcl interacts with 244 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (7 annotations)
Process heterotrimeric G-protein complex assembly, negative regulation of protein refolding, ...
Component cytoplasm
Function protein complex binding
External Resources: FuncBase
Expression
Literature Summary: (1 records)
cDNA source data(83)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(84) cDNA(84)
Microarray probesets(5)
Other database
links
VEGA Gene ModelOTTMUSG00000012647 (Evidence)
Ensembl Gene ModelENSMUSG00000009030 (Evidence)
Entrez Gene67466 (Evidence)
UniGene30709
DFCITC1574951, TC1592021, TC1689404
DoTSDT.485072, DT.97369768
NIA Mouse Gene IndexU022561
Consensus CDS ProjectCCDS15998.1
International Mouse Knockout Project StatusPdcl
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000012647 VEGA Gene Model | MGI Sequence Detail 9259 C57BL/6J ±  kb
transcript OTTMUST00000030098 VEGA | MGI Sequence Detail 2858 Not Applicable 
polypeptide OTTMUSP00000013540 VEGA | MGI Sequence Detail 301 Not Applicable 

For the selected sequences
All sequences(46) RefSeq(6) UniProt(4)
Polymorphisms SNPs within 2kb(28 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001200 Phosducin
InterPro IPR023196 Phosducin N-terminal domain
InterPro IPR024253 Phosducin, thioredoxin-like domain
InterPro IPR012336 Thioredoxin-like fold
Protein Ontology PR:000012460 phosducin-like protein
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:197148 Lai CW, et al., Phosducin-like protein 1 is essential for G-protein assembly and signaling in retinal rod photoreceptors. J Neurosci. 2013 May 1;33(18):7941-51
All references(32)
Other
accession IDs
MGI:2139301

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/16/2014
MGI 5.19
The Jackson Laboratory