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Pdcl Gene Detail
Summary
  • Symbol
    Pdcl
  • Name
    phosducin-like
  • Synonyms
    1200011E13Rik, PhLP1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914716
    NCBI Gene: 67466
  • Gene Overview
    MyGene.info: PDCL
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:37350074-37359332 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 24.19 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    28 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914716
protein coding gene Chr2:37350074-37359820 (-)
129S1/SvImJ MGP_129S1SvImJ_G0025692
protein coding gene Chr2:36030397-36042911 (-)
A/J MGP_AJ_G0025669
protein coding gene Chr2:34563758-34573628 (-)
AKR/J MGP_AKRJ_G0025639
protein coding gene Chr2:35704358-35715792 (-)
BALB/cJ MGP_BALBcJ_G0025664
protein coding gene Chr2:34629513-34640001 (-)
C3H/HeJ MGP_C3HHeJ_G0025425
protein coding gene Chr2:35636321-35646364 (-)
C57BL/6NJ MGP_C57BL6NJ_G0026110
protein coding gene Chr2:37079730-37090688 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023515
protein coding gene Chr2:33235291-33245258 (-)
CAST/EiJ MGP_CASTEiJ_G0024888
protein coding gene Chr2:35540526-35549774 (-)
CBA/J MGP_CBAJ_G0025404
protein coding gene Chr2:38461261-38475872 (-)
DBA/2J MGP_DBA2J_G0025536
protein coding gene Chr2:34311429-34320920 (-)
FVB/NJ MGP_FVBNJ_G0025498
protein coding gene Chr2:34192501-34201777 (-)
LP/J MGP_LPJ_G0025623
protein coding gene Chr2:35930909-35940571 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0025529
protein coding gene Chr2:38040587-38058001 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0026168
protein coding gene Chr2:35589161-35598435 (-)
PWK/PhJ MGP_PWKPhJ_G0024630
protein coding gene Chr2:34202257-34211530 (-)
SPRET/EiJ MGP_SPRETEiJ_G0024435
protein coding gene Chr2:35705990-35715225 (-)
WSB/EiJ MGP_WSBEiJ_G0024956
protein coding gene Chr2:35776125-35785461 (-)



Homology
more
  • Human Ortholog
    PDCL, phosducin like
  • Vertebrate Orthologs
    10
  • Human Ortholog
    PDCL, phosducin like
    Orthology source: HomoloGene, HGNC
  • Synonyms
    PhLP
  • Links
    NCBI Gene ID: 5082
    neXtProt AC: NX_Q13371
    UniProt: Q13371

  • Chr Location
    9q33.2; chr9:122816058-122828656 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 38043
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: PDCL
  • Protein SuperFamily
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotypes from 1 allele in 1 genetic background
    4 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000009030 Ensembl Gene Model | MGI Sequence Detail 9259 C57BL/6J ±  kb
transcript ENSMUST00000009174 Ensembl | MGI Sequence Detail 2858 Not Applicable  
polypeptide ENSMUSP00000009174 Ensembl | MGI Sequence Detail 301 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 85
    cDNA 85

    Microarray probesets 5
Other
Accession IDs
less
MGI:2139301
References
more
  • Summaries
    All 31
    Developmental Gene Expression 1
    Gene Ontology 5
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:253667 Pusapati GV, et al., CRISPR Screens Uncover Genes that Regulate Target Cell Sensitivity to the Morphogen Sonic Hedgehog. Dev Cell. 2018 Jan 8;44(1):113-129.e8

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory