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Ergic2 Gene Detail
Summary
  • Symbol
    Ergic2
  • Name
    ERGIC and golgi 2
  • Synonyms
    1200009B18Rik, 4930572C01Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914706
    NCBI Gene: 67456
  • Gene Overview
    MyGene.info: ERGIC2
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:148179318-148212374 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 78.49 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    75 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914706
protein coding gene Chr6:148179079-148212374 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031502
protein coding gene Chr6:153242660-153278820 (-)
A/J MGP_AJ_G0031477
protein coding gene Chr6:147167319-147201455 (-)
AKR/J MGP_AKRJ_G0031405
protein coding gene Chr6:151554984-151591670 (-)
BALB/cJ MGP_BALBcJ_G0031485
protein coding gene Chr6:146927143-146963638 (-)
C3H/HeJ MGP_C3HHeJ_G0031206
protein coding gene Chr6:151606096-151640891 (-)
C57BL/6NJ MGP_C57BL6NJ_G0031946
protein coding gene Chr6:157319991-157353980 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0029070
protein coding gene Chr6:145890437-145923477 (-)
CAST/EiJ MGP_CASTEiJ_G0030575
protein coding gene Chr6:151257984-151292198 (-)
CBA/J MGP_CBAJ_G0031166
protein coding gene Chr6:163390877-163424080 (-)
DBA/2J MGP_DBA2J_G0031322
protein coding gene Chr6:145964488-145997767 (-)
FVB/NJ MGP_FVBNJ_G0031274
protein coding gene Chr6:144660572-144693926 (-)
LP/J MGP_LPJ_G0031408
protein coding gene Chr6:153359212-153392491 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0031314
protein coding gene Chr6:167010089-167045406 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0031979
protein coding gene Chr6:151393466-151426707 (-)
PWK/PhJ MGP_PWKPhJ_G0030301
protein coding gene Chr6:144455528-144489045 (-)
SPRET/EiJ MGP_SPRETEiJ_G0030125
protein coding gene Chr6:149502626-149536058 (-)
WSB/EiJ MGP_WSBEiJ_G0030668
protein coding gene Chr6:152006002-152039874 (-)



Homology
more
  • Human Ortholog
    ERGIC2, ERGIC and golgi 2
  • Vertebrate Orthologs
    9
  • Human Ortholog
    ERGIC2, ERGIC and golgi 2
    Orthology source: HomoloGene, HGNC
  • Synonyms
    cd002, CDA14, Erv41, PTX1
  • Links
    NCBI Gene ID: 51290
    neXtProt AC: NX_Q96RQ1
    UniProt: Q96RQ1

  • Chr Location
    12p11.22; chr12:29336544-29381234 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Mice homozygous for an ENU-induced point mutation affecting the donor splice site of intron 5 exhibit swelling of the hind feet and tail.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 67456 NCBI Gene Model | MGI Sequence Detail 33057 C57BL/6J ±  kb
transcript NM_026168 RefSeq | MGI Sequence Detail 3935 C57BL/6  
polypeptide Q9CR89 UniProt | EBI | MGI Sequence Detail 377 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    7 Sequences
  • InterPro Domains
    IPR012936 Endoplasmic reticulum vesicle transporter, C-terminal
    IPR039542 Endoplasmic reticulum vesicle transporter, N-terminal
Molecular
Reagents
less
  • All nucleic 24
    cDNA 24

    Microarray probesets 6
Other
Accession IDs
less
MGI:1889339, MGI:1914993
References
more
  • Summaries
    All 32
    Gene Ontology 4
    Phenotypes 7
  • Earliest
    J:68708 Hrabe de Angelis MH, et al., Genome-wide, large-scale production of mutant mice by ENU mutagenesis. Nat Genet. 2000 Aug;25(4):444-7
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory