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C1qtnf4 Gene Detail
Summary
  • Symbol
    C1qtnf4
  • Name
    C1q and tumor necrosis factor related protein 4
  • Synonyms
    0710001E10Rik, 9430004J15Rik, CTRP4
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914695
    NCBI Gene: 67445
  • Alliance
  • Transcription Start Sites
    15 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:90885860-90890525 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 50.43 cM, cytoband E1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    7 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914695
protein coding gene Chr2:90885388-90890526 (.)
129S1/SvImJ MGP_129S1SvImJ_G0026134
protein coding gene Chr2:92172820-92177485 (+)
A/J MGP_AJ_G0026095
protein coding gene Chr2:88492329-88496994 (+)
AKR/J MGP_AKRJ_G0026076
protein coding gene Chr2:90941406-90946071 (+)
BALB/cJ MGP_BALBcJ_G0026104
protein coding gene Chr2:88654243-88658908 (+)
C3H/HeJ MGP_C3HHeJ_G0025855
protein coding gene Chr2:91217114-91221752 (+)
C57BL/6NJ MGP_C57BL6NJ_G0026555
protein coding gene Chr2:95423711-95428376 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0023946
protein coding gene Chr2:85010792-85015629 (+)
CAST/EiJ MGP_CASTEiJ_G0025320
protein coding gene Chr2:91733993-91738660 (+)
CBA/J MGP_CBAJ_G0025833
protein coding gene Chr2:98664595-98669260 (+)
DBA/2J MGP_DBA2J_G0025969
protein coding gene Chr2:88088958-88093623 (+)
FVB/NJ MGP_FVBNJ_G0025932
protein coding gene Chr2:87193180-87197747 (+)
LP/J MGP_LPJ_G0026073
protein coding gene Chr2:92381971-92386636 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0025958
protein coding gene Chr2:101719180-101723844 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0026609
protein coding gene Chr2:90991663-90996328 (+)
PWK/PhJ MGP_PWKPhJ_G0025055
protein coding gene Chr2:87813120-87817830 (+)
SPRET/EiJ MGP_SPRETEiJ_G0024856
protein coding gene Chr2:90576860-90581545 (+)
WSB/EiJ MGP_WSBEiJ_G0025387
protein coding gene Chr2:91583308-91587974 (+)



Homology
more
  • Human Ortholog
    C1QTNF4, C1q and TNF related 4
  • Vertebrate Orthologs
    9
  • Human Ortholog
    C1QTNF4, C1q and TNF related 4
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CTRP4, ZACRP4
  • Links
    NCBI Gene ID: 114900
    neXtProt AC: NX_Q9BXJ3
    UniProt: Q9BXJ3

  • Chr Location
    11p11.2; chr11:47589664-47596336 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    8 phenotype references
Male mice homozygous for a mutation are viable and show normal fertility.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000040794 Ensembl Gene Model | MGI Sequence Detail 4666 C57BL/6J ±  kb
transcript ENSMUST00000111466 Ensembl | MGI Sequence Detail 1290 Not Applicable  
polypeptide ENSMUSP00000107091 Ensembl | MGI Sequence Detail 326 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 41
    cDNA 41

    Microarray probesets 2
Other
Accession IDs
less
MGI:1924490
References
more
  • Summaries
    All 29
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 8
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:234235 Miyata H, et al., Genome engineering uncovers 54 evolutionarily conserved and testis-enriched genes that are not required for male fertility in mice. Proc Natl Acad Sci U S A. 2016 Jul 12;113(28):7704-10

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory