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Ccdc127 Gene Detail
Summary
  • Symbol
    Ccdc127
  • Name
    coiled-coil domain containing 127
  • Synonyms
    0610011N22Rik, 5430420E17Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914683
    NCBI Gene: 67433
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:74350317-74365783 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 40.17 cM, cytoband C1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    86 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914683
protein coding gene Chr13:74350309-74365783 (+)
129S1/SvImJ MGP_129S1SvImJ_G0020764
protein coding gene Chr13:74851140-74867109 (+)
A/J MGP_AJ_G0020720
protein coding gene Chr13:72178819-72194353 (+)
AKR/J MGP_AKRJ_G0020694
protein coding gene Chr13:74435844-74451802 (+)
BALB/cJ MGP_BALBcJ_G0020717
protein coding gene Chr13:72672278-72687708 (+)
C3H/HeJ MGP_C3HHeJ_G0020511
protein coding gene Chr13:74123702-74140092 (+)
C57BL/6NJ MGP_C57BL6NJ_G0021154
protein coding gene Chr13:77333634-77351707 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0018721
protein coding gene Chr13:69008944-69024190 (+)
CAST/EiJ MGP_CASTEiJ_G0020028
protein coding gene Chr13:73208469-73223914 (+)
CBA/J MGP_CBAJ_G0020470
protein coding gene Chr13:80207598-80224950 (+)
DBA/2J MGP_DBA2J_G0020595
protein coding gene Chr13:71997235-72012708 (+)
FVB/NJ MGP_FVBNJ_G0020575
protein coding gene Chr13:71020452-71036046 (+)
LP/J MGP_LPJ_G0020668
protein coding gene Chr13:75086762-75102247 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0020603
protein coding gene Chr13:78610533-78626418 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0021193
protein coding gene Chr13:73756523-73772356 (+)
PWK/PhJ MGP_PWKPhJ_G0019782
protein coding gene Chr13:70739590-70752050 (+)
SPRET/EiJ MGP_SPRETEiJ_G0019605
protein coding gene Chr13:70248031-70265640 (+)
WSB/EiJ MGP_WSBEiJ_G0020086
protein coding gene Chr13:74312381-74327703 (+)



Homology
more
  • Human Ortholog
    CCDC127, coiled-coil domain containing 127
  • Vertebrate Orthologs
    11
  • Human Ortholog
    CCDC127, coiled-coil domain containing 127
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 133957
    neXtProt AC: NX_Q96BQ5
    UniProt: Q96BQ5

  • Chr Location
    5p15.33; chr5:204760-218182 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    13 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
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Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 67433 NCBI Gene Model | MGI Sequence Detail 15467 C57BL/6J ±  kb
transcript NM_001168658 RefSeq | MGI Sequence Detail 5764 C57BL/6  
polypeptide Q3TC33 UniProt | EBI | MGI Sequence Detail 260 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 14
    cDNA 14

    Microarray probesets 5
Other
Accession IDs
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MGI:1918606, MGI:2145196, MGI:2145408
References
more
  • Summaries
    All 35
    Phenotypes 13
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:236599 Dickinson ME, et al., High-throughput discovery of novel developmental phenotypes. Nature. 2016 Sep 14;537(7621):508-514

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/01/2019
MGI 6.14
The Jackson Laboratory