About   Help   FAQ
4921536K21Rik Gene Detail
Summary
  • Symbol
    4921536K21Rik
  • Name
    RIKEN cDNA 4921536K21 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914680
    NCBI Gene: 67430
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:3886088-3895098 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 2.73 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    10 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914680
protein coding gene Chr11:3886087-3895126 (-)
129S1/SvImJ MGP_129S1SvImJ_G0017964
protein coding gene Chr11:788239-805259 (-)
A/J MGP_AJ_G0017937
protein coding gene Chr11:819282-828214 (-)
AKR/J MGP_AKRJ_G0017901
protein coding gene Chr11:846342-855344 (-)
BALB/cJ MGP_BALBcJ_G0017905
protein coding gene Chr11:783866-792862 (-)
C3H/HeJ MGP_C3HHeJ_G0017718
protein coding gene Chr11:774065-784012 (-)
C57BL/6NJ MGP_C57BL6NJ_G0018358
protein coding gene Chr11:865483-875257 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0016017
protein coding gene Chr11:714693-724241 (-)
CAST/EiJ MGP_CASTEiJ_G0017280
protein coding gene Chr11:743951-752982 (-)
CBA/J MGP_CBAJ_G0017693
protein coding gene Chr11:1072597-1084339 (-)
DBA/2J MGP_DBA2J_G0017804
protein coding gene Chr11:725136-734200 (-)
FVB/NJ MGP_FVBNJ_G0017795
protein coding gene Chr11:761657-770833 (-)
LP/J MGP_LPJ_G0017874
protein coding gene Chr11:876020-886356 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0017821
protein coding gene Chr11:779687-789860 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0018397
protein coding gene Chr11:862520-874387 (-)
PWK/PhJ MGP_PWKPhJ_G0017061
protein coding gene Chr11:717786-727121 (-)
SPRET/EiJ MGP_SPRETEiJ_G0016857
protein coding gene Chr11:819688-830209 (-)
WSB/EiJ MGP_WSBEiJ_G0017334
protein coding gene Chr11:744659-754946 (-)



Homology
more
  • Human Ortholog
    C5orf52, chromosome 5 open reading frame 52
  • Vertebrate Orthologs
    6
  • Human Ortholog
    C5orf52, chromosome 5 open reading frame 52
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 100190949
    neXtProt AC: NX_A6NGY3
    UniProt: A6NGY3

  • Chr Location
    5q33.3; chr5:157671237-157680176 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    3 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000020434 Ensembl Gene Model | MGI Sequence Detail 9011 C57BL/6J ±  kb
transcript ENSMUST00000020712 Ensembl | MGI Sequence Detail 2590 Not Applicable  
polypeptide ENSMUSP00000020712 Ensembl | MGI Sequence Detail 168 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR038935 Uncharacterized protein C5orf52
Molecular
Reagents
less
  • All nucleic 12
    cDNA 12

    Microarray probesets 3
Other
Accession IDs
less
MGI:2144455
References
more
  • Summaries
    All 20
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
03/13/2019
MGI 6.13
The Jackson Laboratory