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Nudcd1 Gene Detail
Summary
  • Symbol
    Nudcd1
  • Name
    NudC domain containing 1
  • Synonyms
    4921532K09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914679
    NCBI Gene: 67429
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:44375227-44428307 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 16.91 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    424 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914679
protein coding gene Chr15:44373163-44428307 (-)
129S1/SvImJ MGP_129S1SvImJ_G0021829
protein coding gene Chr15:42992102-43045677 (-)
A/J MGP_AJ_G0021789
protein coding gene Chr15:41348377-41405440 (-)
AKR/J MGP_AKRJ_G0021770
protein coding gene Chr15:42563792-42627752 (-)
BALB/cJ MGP_BALBcJ_G0021796
protein coding gene Chr15:41430852-41485158 (-)
C3H/HeJ MGP_C3HHeJ_G0021570
protein coding gene Chr15:42484328-42539329 (-)
C57BL/6NJ MGP_C57BL6NJ_G0022235
protein coding gene Chr15:44657022-44710070 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0019772
protein coding gene Chr15:38889239-38943909 (-)
CAST/EiJ MGP_CASTEiJ_G0021087
protein coding gene Chr15:43010407-43064251 (-)
CBA/J MGP_CBAJ_G0021539
protein coding gene Chr15:46207572-46271391 (-)
DBA/2J MGP_DBA2J_G0021663
protein coding gene Chr15:41154503-41214100 (-)
FVB/NJ MGP_FVBNJ_G0021641
protein coding gene Chr15:40457917-40511025 (-)
LP/J MGP_LPJ_G0021733
protein coding gene Chr15:42754902-42811770 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0021665
protein coding gene Chr15:49580210-49646614 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0022258
protein coding gene Chr15:42757933-42818478 (-)
PWK/PhJ MGP_PWKPhJ_G0020832
protein coding gene Chr15:41195698-41261309 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0021142
protein coding gene Chr15:42656074-42707091 (-)



Homology
more
  • Human Ortholog
    NUDCD1, NudC domain containing 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    NUDCD1, NudC domain containing 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CML66, OVA66
  • Links
    NCBI Gene ID: 84955
    neXtProt AC: NX_Q96RS6
    UniProt: Q96RS6

  • Chr Location
    8q23.1; chr8:109240919-109334205 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 12128
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: NUDCD1
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 67429 NCBI Gene Model | MGI Sequence Detail 53081 C57BL/6J ±  kb
transcript NM_026149 RefSeq | MGI Sequence Detail 3447 C57BL/6  
polypeptide Q6PIP5 UniProt | EBI | MGI Sequence Detail 582 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 20
    cDNA 20

    Microarray probesets 6
Other
Accession IDs
less
MGI:2145888, MGI:2146211, MGI:2146240
References
more
  • Summaries
    All 34
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 10
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory