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Kctd16 Gene Detail
Summary
  • Symbol
    Kctd16
  • Name
    potassium channel tetramerisation domain containing 16
  • Synonyms
    4930434H12Rik, LOC383347
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914659
    NCBI Gene: 383348
Location & Maps
more
  • Sequence Map
    Chr18:40258361-40531168 bp, + strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser
  • Download
    Sequence
      272808 bp   ±  kb flank

  • Genome Browsers
    VEGA | Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 18, 21.30 cM, cytoband B3
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    KCTD16, potassium channel tetramerization domain containing 16
  • Vertebrate Orthologs
    10
  • Human Ortholog
    KCTD16, potassium channel tetramerization domain containing 16
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 57528
    neXtProt AC: NX_Q68DU8
    UniProt: Q68DU8

  • Chr Location
    5q31.3; chr5:144170723-144485686 (+)  GRCh38.p7
  • HomoloGene
    Vertebrate Homology Class 44779
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: KCTD16
  • Gene Tree
    Kctd16
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    9
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    134
  • Tissues
    17
  • cDNA Data
    13
  • Literature Summary
    1
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000051401 Ensembl Gene Model | MGI Sequence Detail 272808 C57BL/6J ±  kb
transcript ENSMUST00000091927 Ensembl | MGI Sequence Detail 1349 Not Applicable  
polypeptide ENSMUSP00000089547 Ensembl | MGI Sequence Detail 427 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    1593 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 13
    cDNA 13

    Microarray probesets 1
Other
Accession IDs
less
MGI:2686113
References
more
  • Summaries
    All 22
    Developmental Gene Expression 1
    Gene Ontology 3
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
06/13/2017
MGI 6.10 		The Jackson Laboratory