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Cylc1 Gene Detail
Summary
  • Symbol
    Cylc1
  • Name
    cylicin, basic protein of sperm head cytoskeleton 1
  • Synonyms
    4930401M13Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914657
    NCBI Gene: 67407
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:111110418-111125854 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 48.20 cM, cytoband D
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    17 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914657
protein coding gene ChrX:111110418-111125961 (+)
129S1/SvImJ MGP_129S1SvImJ_G0036025
protein coding gene ChrX:107965407-107978571 (+)
A/J MGP_AJ_G0036005
protein coding gene ChrX:107861605-107880276 (+)
AKR/J MGP_AKRJ_G0035924
protein coding gene ChrX:111184800-111203384 (+)
BALB/cJ MGP_BALBcJ_G0035996
protein coding gene ChrX:106481147-106494103 (+)
C3H/HeJ MGP_C3HHeJ_G0035702
protein coding gene ChrX:108417685-108438558 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036521
protein coding gene ChrX:111100978-111118818 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0033349
protein coding gene ChrX:104692349-104703528 (+)
CAST/EiJ MGP_CASTEiJ_G0034988
protein coding gene ChrX:92357320-92369926 (+)
CBA/J MGP_CBAJ_G0035678
protein coding gene ChrX:114617594-114627779 (+)
DBA/2J MGP_DBA2J_G0035831
protein coding gene ChrX:106997539-107012337 (+)
FVB/NJ MGP_FVBNJ_G0035772
protein coding gene ChrX:106369551-106391942 (+)
LP/J MGP_LPJ_G0035924
protein coding gene ChrX:108867570-108880179 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035803
protein coding gene ChrX:119886153-119900270 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036548
protein coding gene ChrX:107516076-107529659 (+)
PWK/PhJ MGP_PWKPhJ_G0034684
protein coding gene ChrX:89886317-89900328 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034513
protein coding gene ChrX:93195135-93214724 (+)
WSB/EiJ MGP_WSBEiJ_G0035126
protein coding gene ChrX:106210704-106223632 (+)



Homology
more
  • Human Ortholog
    CYLC1, cylicin 1
  • Vertebrate Orthologs
    2
  • Human Ortholog
    CYLC1, cylicin 1
    Orthology source: HGNC
  • Synonyms
    CYCL1
  • Links
    NCBI Gene ID: 1538
    neXtProt AC: NX_P35663
    UniProt: P35663

  • Chr Location
    Xq21.1; chrX:83861126-83886700 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000073001 Ensembl Gene Model | MGI Sequence Detail 15437 C57BL/6J ±  kb
transcript ENSMUST00000210720 Ensembl | MGI Sequence Detail 1969 Not Applicable  
polypeptide ENSMUSP00000147334 Ensembl | MGI Sequence Detail 642 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 2
References
more
  • Summaries
    All 19
    Gene Ontology 2
    Phenotypes 1
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory