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4833420G17Rik Gene Detail
Summary
  • Symbol
    4833420G17Rik
  • Name
    RIKEN cDNA 4833420G17 gene
  • Synonyms
    2210017J06Rik, 5730533D17Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914642
    NCBI Gene: 67392
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:119462768-119486120 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 67.24 cM, cytoband D2.3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    345 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914642
protein coding gene Chr13:119462015-119486120 (+)
129S1/SvImJ MGP_129S1SvImJ_G0020971
protein coding gene Chr13:122483561-122510094 (+)
A/J MGP_AJ_G0020921
protein coding gene Chr13:117521998-117545849 (+)
AKR/J MGP_AKRJ_G0020896
protein coding gene Chr13:121002239-121025459 (+)
BALB/cJ MGP_BALBcJ_G0020921
protein coding gene Chr13:118195250-118220598 (+)
C3H/HeJ MGP_C3HHeJ_G0020710
protein coding gene Chr13:120815441-120840518 (+)
C57BL/6NJ MGP_C57BL6NJ_G0021357
protein coding gene Chr13:126057227-126085058 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0018926
protein coding gene Chr13:112503529-112527078 (+)
CAST/EiJ MGP_CASTEiJ_G0020229
protein coding gene Chr13:120680308-120703246 (+)
CBA/J MGP_CBAJ_G0020672
protein coding gene Chr13:130905796-130928903 (+)
DBA/2J MGP_DBA2J_G0020795
protein coding gene Chr13:117132950-117156168 (+)
FVB/NJ MGP_FVBNJ_G0020779
protein coding gene Chr13:115728546-115752427 (+)
LP/J MGP_LPJ_G0020871
protein coding gene Chr13:122450828-122474973 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0020807
protein coding gene Chr13:131537700-131563885 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0021393
protein coding gene Chr13:120507696-120532059 (+)
PWK/PhJ MGP_PWKPhJ_G0019982
protein coding gene Chr13:116018443-116042435 (+)
SPRET/EiJ MGP_SPRETEiJ_G0019805
protein coding gene Chr13:116882833-116905494 (+)
WSB/EiJ MGP_WSBEiJ_G0020287
protein coding gene Chr13:121181791-121207771 (+)



Homology
more
  • Human Ortholog
    C5orf34, chromosome 5 open reading frame 34
  • Vertebrate Orthologs
    9
  • Human Ortholog
    C5orf34, chromosome 5 open reading frame 34
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 375444
    neXtProt AC: NX_Q96MH7
    UniProt: Q96MH7

  • Chr Location
    5p12; chr5:43486699-43515433 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    7 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Expression
less
  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000062822 Ensembl Gene Model | MGI Sequence Detail 23353 C57BL/6J ±  kb
    transcript ENSMUST00000026519 Ensembl | MGI Sequence Detail 2565 Not Applicable  
    polypeptide ENSMUSP00000026519 Ensembl | MGI Sequence Detail 639 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      2 Sequences
    • InterPro Domains
      IPR027865 Domain of unknown function DUF4520
      IPR027830 Domain of unknown function DUF4524
    Molecular
    Reagents
    less
    • All nucleic 17
      cDNA 17

      Microarray probesets 7
    Other
    Accession IDs
    less
    MGI:1913905, MGI:1917366, MGI:2145411, MGI:2145524
    References
    more
    • Summaries
      All 29
      Developmental Gene Expression 1
      Phenotypes 7
    • Earliest
      J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
    • Latest
      J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    last database update
    10/01/2019
    MGI 6.14
    The Jackson Laboratory