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C1qtnf12 Gene Detail
Summary
  • Symbol
    C1qtnf12
  • Name
    C1q and tumor necrosis factor related 12
  • Synonyms
    1110035L05Rik, alipolin, C1qdc2, Fam132a
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914639
    NCBI Gene: 67389
  • Gene Overview
    MyGene.info: C1QTNF12
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:155962318-155966629 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 87.66 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    94 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914639
protein coding gene Chr4:155962312-155966629 (.)
129S1/SvImJ MGP_129S1SvImJ_G0029240
protein coding gene Chr4:160321299-160325581 (+)
A/J MGP_AJ_G0029205
protein coding gene Chr4:153572886-153577168 (+)
AKR/J MGP_AKRJ_G0029153
protein coding gene Chr4:157750668-157754950 (+)
BALB/cJ MGP_BALBcJ_G0029221
protein coding gene Chr4:154043419-154047701 (+)
C3H/HeJ MGP_C3HHeJ_G0028942
protein coding gene Chr4:158311233-158315515 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029670
protein coding gene Chr4:166009059-166013370 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026914
protein coding gene Chr4:145850667-145855002 (+)
CAST/EiJ MGP_CASTEiJ_G0028354
protein coding gene Chr4:155754165-155758444 (+)
CBA/J MGP_CBAJ_G0028904
protein coding gene Chr4:171042744-171047026 (+)
DBA/2J MGP_DBA2J_G0029053
protein coding gene Chr4:153591385-153595667 (+)
FVB/NJ MGP_FVBNJ_G0029016
protein coding gene Chr4:152839347-152843642 (+)
LP/J MGP_LPJ_G0029143
protein coding gene Chr4:160266154-160270465 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029043
protein coding gene Chr4:173840734-173845029 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029702
protein coding gene Chr4:158386665-158390947 (+)
PWK/PhJ MGP_PWKPhJ_G0028075
protein coding gene Chr4:149732932-149737238 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027909
protein coding gene Chr4:152639983-152644296 (+)
WSB/EiJ MGP_WSBEiJ_G0028434
protein coding gene Chr4:158555564-158559851 (+)



Homology
more
  • Human Ortholog
    C1QTNF12, C1q and TNF related 12
  • Vertebrate Orthologs
    8
  • Human Ortholog
    C1QTNF12, C1q and TNF related 12
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C1QDC2, CTRP12, FAM132A
  • Links
    NCBI Gene ID: 388581
    neXtProt AC: NX_Q5T7M4
    UniProt: Q5T7M4

  • Chr Location
    1p36.33; chr1:1242446-1247218 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000023571 Ensembl Gene Model | MGI Sequence Detail 4312 C57BL/6J ±  kb
transcript ENSMUST00000024338 Ensembl | MGI Sequence Detail 1315 Not Applicable  
polypeptide ENSMUSP00000024338 Ensembl | MGI Sequence Detail 308 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 66
    Genomic 2
    cDNA 64

    Microarray probesets 5
References
more
  • Summaries
    All 35
    Developmental Gene Expression 8
    Gene Ontology 4
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:264384 Ramalingam H, et al., Disparate levels of beta-catenin activity determine nephron progenitor cell fate. Dev Biol. 2018 Aug 1;440(1):13-21

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory