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Hdhd1a
Gene Detail
Symbol

Name
ID
Hdhd1a
haloacid dehalogenase-like hydrolase domain containing 1A
MGI:1914615
Synonyms
1700121L12Rik, GS1
Feature Type
protein coding gene
Genetic Map
Chromosome 18
27.32 cM, cytoband C
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr18:50567656-50568699 bp, - strand
From NCBI annotation of GRCm38

  1044 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:8093  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 2 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: HDHD1
Protein SuperFamily: phosphoglycolate phosphatase
Gene Tree: Hdhd1a

Human
homologs
HDHD1, haloacid dehalogenase-like hydrolase domain containing 1
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 8226
neXtProt AC: NX_Q08623

Human Synonyms: DXF68S1E, FAM16AX, GS1, HDHD1A

Human Chr (Location): Xp22.32; chrX:7048920-7148190 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(1) : Targeted(1)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Hdhd1a interacts with 45 markers (Mir22, Mir29b-1, Mir125b-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (7 annotations)
Process metabolic process, nucleotide metabolic process
Component extracellular exosome
Function hydrolase activity, metal ion binding, ...
External Resources: FuncBase
Expression
cDNA source data(8)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase hdhd1    NEW 
Molecular
reagents
All nucleic(8) cDNA(8)
Microarray probesets(2)
Other database
links
Ensembl Gene Model ENSMUSG00000048875 (Evidence)
Entrez Gene 67365 (Evidence)
UniGene 158150
DFCI TC1589118
DoTS DT.55120182
NIA Mouse Gene Index U038422
EC 3.1.3.96
Consensus CDS Project CCDS29244.1
International Mouse Phenotyping Consortium Status Hdhd1a
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 67365 NCBI Gene Model | MGI Sequence Detail 1044 C57BL/6J ±  kb
transcript NM_026108 RefSeq | MGI Sequence Detail 1044 C57BL/6 
polypeptide Q9D5U5 UniProt | EBI | MGI Sequence Detail 234 Not Applicable 

For the selected sequences
All sequences(15) RefSeq(2) UniProt(2)
Polymorphisms
SNPs within 2kb(44 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR023214 HAD-like domain
InterPro IPR006439 HAD-superfamily hydrolase, subfamily IA, variant 1
Graphical View of Protein Domain Structure
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(25)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/23/2015
MGI 5.22
The Jackson Laboratory