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Larp1b Gene Detail
Summary
  • Symbol
    Larp1b
  • Name
    La ribonucleoprotein domain family, member 1B
  • Synonyms
    1700108L22Rik, 4933421B21Rik, Larp2
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914604
    NCBI Gene: 214048
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:40949828-41040234 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 19.61 cM, cytoband C
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    299 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914604
protein coding gene Chr3:40949720-41040234 (+)
129S1/SvImJ MGP_129S1SvImJ_G0027184
protein coding gene Chr3:38948889-39042579 (+)
A/J MGP_AJ_G0027144
protein coding gene Chr3:37997733-38087840 (+)
AKR/J MGP_AKRJ_G0027113
protein coding gene Chr3:38718127-38808508 (+)
BALB/cJ MGP_BALBcJ_G0027156
protein coding gene Chr3:37769176-37859637 (+)
C3H/HeJ MGP_C3HHeJ_G0026899
protein coding gene Chr3:38841370-38933821 (+)
C57BL/6NJ MGP_C57BL6NJ_G0027602
protein coding gene Chr3:40567554-40658710 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0024962
protein coding gene Chr3:35491763-35593158 (+)
CAST/EiJ MGP_CASTEiJ_G0026352
protein coding gene Chr3:38705064-38801307 (+)
CBA/J MGP_CBAJ_G0026876
protein coding gene Chr3:41716100-41811407 (+)
DBA/2J MGP_DBA2J_G0027010
protein coding gene Chr3:37462722-37554040 (+)
FVB/NJ MGP_FVBNJ_G0026978
protein coding gene Chr3:36835365-36925368 (+)
LP/J MGP_LPJ_G0027122
protein coding gene Chr3:39686131-39783612 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0026996
protein coding gene Chr3:44178728-44273807 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0027661
protein coding gene Chr3:38584478-38677522 (+)
PWK/PhJ MGP_PWKPhJ_G0026084
protein coding gene Chr3:37135608-37230352 (+)
SPRET/EiJ MGP_SPRETEiJ_G0025897
protein coding gene Chr3:37977103-38073229 (+)
WSB/EiJ MGP_WSBEiJ_G0026426
protein coding gene Chr3:38593157-38683637 (+)



Homology
more
  • Human Ortholog
    LARP1B, La ribonucleoprotein domain family member 1B
  • Vertebrate Orthologs
    2
  • Human Ortholog
    LARP1B, La ribonucleoprotein domain family member 1B
    Orthology source: HGNC
  • Synonyms
    LARP2
  • Links
    NCBI Gene ID: 55132
    neXtProt AC: NX_Q659C4
    UniProt: Q659C4

  • Chr Location
    4q28.2; chr4:128060655-128222931 (+)  GRCh38.p7

Human Diseases
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  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000025762 Ensembl Gene Model | MGI Sequence Detail 90407 C57BL/6J ±  kb
transcript ENSMUST00000048490 Ensembl | MGI Sequence Detail 2497 Not Applicable  
polypeptide ENSMUSP00000037127 Ensembl | MGI Sequence Detail 541 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    9 Sequences
  • InterPro Domains
    IPR006630 La-type HTH domain
    IPR006607 Protein of unknown function DM15
    IPR036390 Winged helix DNA-binding domain superfamily
    IPR036388 Winged helix-like DNA-binding domain superfamily
Molecular
Reagents
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  • All nucleic 16
    cDNA 16

    Microarray probesets 6
Other
Accession IDs
less
MGI:1918324, MGI:2139606
References
more
  • Summaries
    All 31
    Diseases 1
    Phenotypes 8
  • Earliest
    J:64276 Lyon MF, et al., Dose-response curves for radiation-induced gene mutations in mouse oocytes and their interpretation. Mutat Res. 1979 Nov;63(1):161-73
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/11/2019
MGI 6.14
The Jackson Laboratory