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Tctex1d1 Gene Detail
Summary
  • Symbol
    Tctex1d1
  • Name
    Tctex1 domain containing 1
  • Synonyms
    1700055O19Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914594
    NCBI Gene: 67344
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:102978606-103005594 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 47.25 cM, cytoband C6
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    215 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914594
protein coding gene Chr4:102978388-103005594 (+)
129S1/SvImJ MGP_129S1SvImJ_G0028502
protein coding gene Chr4:103378833-103404946 (+)
A/J MGP_AJ_G0028465
protein coding gene Chr4:99781033-99806087 (+)
AKR/J MGP_AKRJ_G0028412
protein coding gene Chr4:102196341-102221601 (+)
BALB/cJ MGP_BALBcJ_G0028484
protein coding gene Chr4:99975161-100000905 (+)
C3H/HeJ MGP_C3HHeJ_G0028198
protein coding gene Chr4:102988018-103014431 (+)
C57BL/6NJ MGP_C57BL6NJ_G0028924
protein coding gene Chr4:107272622-107299690 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026215
protein coding gene Chr4:95123665-95149478 (+)
CAST/EiJ MGP_CASTEiJ_G0027634
protein coding gene Chr4:100743310-100769166 (+)
CBA/J MGP_CBAJ_G0028167
protein coding gene Chr4:110677060-110706830 (+)
DBA/2J MGP_DBA2J_G0028315
protein coding gene Chr4:99432352-99457966 (+)
FVB/NJ MGP_FVBNJ_G0028282
protein coding gene Chr4:98288547-98313758 (+)
LP/J MGP_LPJ_G0028416
protein coding gene Chr4:103678734-103704742 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028309
protein coding gene Chr4:116140140-116167374 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0028959
protein coding gene Chr4:102416675-102443199 (+)
PWK/PhJ MGP_PWKPhJ_G0027360
protein coding gene Chr4:97646798-97667717 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027184
protein coding gene Chr4:99829119-99854909 (+)
WSB/EiJ MGP_WSBEiJ_G0027714
protein coding gene Chr4:102583296-102609889 (+)



Homology
more
  • Human Ortholog
    TCTEX1D1, Tctex1 domain containing 1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    TCTEX1D1, Tctex1 domain containing 1
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 200132
    neXtProt AC: NX_Q8N7M0
    UniProt: Q8N7M0

  • Chr Location
    1p31.3; chr1:66752147-66779051 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000028523 Ensembl Gene Model | MGI Sequence Detail 26989 C57BL/6J ±  kb
transcript ENSMUST00000223169 Ensembl | MGI Sequence Detail 683 Not Applicable  
polypeptide ENSMUSP00000152761 Ensembl | MGI Sequence Detail 177 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 2
References
more
  • Summaries
    All 26
    Developmental Gene Expression 1
    Phenotypes 9
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory