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1700037H04Rik Gene Detail
Summary
  • Symbol
    1700037H04Rik
  • Name
    RIKEN cDNA 1700037H04 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914576
    NCBI Gene: 67326
  • Gene Overview
    MyGene.info: C20orf27
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:131146324-131160081 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 63.28 cM, cytoband F3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    102 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914576
protein coding gene Chr2:131146315-131160081 (-)
129S1/SvImJ MGP_129S1SvImJ_G0026523
protein coding gene Chr2:134657452-134672851 (-)
A/J MGP_AJ_G0026487
protein coding gene Chr2:129192827-129206568 (-)
AKR/J MGP_AKRJ_G0026462
protein coding gene Chr2:132926111-132939874 (-)
BALB/cJ MGP_BALBcJ_G0026499
protein coding gene Chr2:129578845-129592936 (-)
C3H/HeJ MGP_C3HHeJ_G0026242
protein coding gene Chr2:133359837-133374141 (-)
C57BL/6NJ MGP_C57BL6NJ_G0026944
protein coding gene Chr2:138794904-138809296 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0024321
protein coding gene Chr2:123936988-123950666 (-)
CAST/EiJ MGP_CASTEiJ_G0025703
protein coding gene Chr2:133643461-133657211 (-)
CBA/J MGP_CBAJ_G0026222
protein coding gene Chr2:143961491-143978541 (-)
DBA/2J MGP_DBA2J_G0026356
protein coding gene Chr2:128583048-128597041 (-)
FVB/NJ MGP_FVBNJ_G0026320
protein coding gene Chr2:127211665-127226512 (-)
LP/J MGP_LPJ_G0026461
protein coding gene Chr2:134887632-134902229 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0026340
protein coding gene Chr2:147778571-147794320 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0026999
protein coding gene Chr2:132881976-132895765 (-)
PWK/PhJ MGP_PWKPhJ_G0025439
protein coding gene Chr2:128152404-128166428 (-)
SPRET/EiJ MGP_SPRETEiJ_G0025241
protein coding gene Chr2:132033399-132047187 (-)
WSB/EiJ MGP_WSBEiJ_G0025777
protein coding gene Chr2:133804162-133817879 (-)



Homology
more
  • Human Ortholog
    C20orf27, chromosome 20 open reading frame 27
  • Vertebrate Orthologs
    10
  • Human Ortholog
    C20orf27, chromosome 20 open reading frame 27
    Orthology source: HGNC, HomoloGene
  • Links
    NCBI Gene ID: 54976
    neXtProt AC: NX_Q9GZN8
    UniProt: Q9GZN8

  • Chr Location
    20p13; chr20:3753499-3768388 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
  • All Mutations and Alleles
    35
  • Chemically induced (other)
    1
  • Gene trapped
    29
  • Radiation induced
    1
  • Targeted
    4
  • Genomic Mutations
    2 involving 1700037H04Rik
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000027327 Ensembl Gene Model | MGI Sequence Detail 13758 C57BL/6J ±  kb
transcript ENSMUST00000028800 Ensembl | MGI Sequence Detail 832 Not Applicable  
polypeptide ENSMUSP00000028800 Ensembl | MGI Sequence Detail 177 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    5 Sequences
  • InterPro Domains
    IPR026794 Uncharacterised protein family UPF0687
Molecular
Reagents
less
  • All nucleic 74
    cDNA 74

    Microarray probesets 4
References
more
  • Summaries
    All 31
    Phenotypes 11
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/04/2018
MGI 6.13
The Jackson Laboratory