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Iqcf4 Gene Detail
Summary
  • Symbol
    Iqcf4
  • Name
    IQ motif containing F4
  • Synonyms
    1700042N06Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914570
    NCBI Gene: 67320
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:106568319-106570967 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 57.80 cM, cytoband F1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    36 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914570
protein coding gene Chr9:106568319-106570996 (-)
129S1/SvImJ MGP_129S1SvImJ_G0035239
protein coding gene Chr9:108386082-108388619 (-)
A/J MGP_AJ_G0035218
protein coding gene Chr9:104458478-104461027 (-)
AKR/J MGP_AKRJ_G0035150
protein coding gene Chr9:107064786-107067305 (-)
BALB/cJ MGP_BALBcJ_G0035212
protein coding gene Chr9:104145971-104148610 (-)
C3H/HeJ MGP_C3HHeJ_G0034922
protein coding gene Chr9:107476651-107480024 (-)
C57BL/6NJ MGP_C57BL6NJ_G0035732
protein coding gene Chr9:111370202-111372843 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0032630
protein coding gene Chr9:101945175-101947830 (-)
CAST/EiJ MGP_CASTEiJ_G0034233
protein coding gene Chr9:107396455-107398965 (-)
CBA/J MGP_CBAJ_G0034890
protein coding gene Chr9:115313650-115316301 (-)
DBA/2J MGP_DBA2J_G0035051
protein coding gene Chr9:103922864-103925404 (-)
FVB/NJ MGP_FVBNJ_G0034999
protein coding gene Chr9:102701754-102704832 (-)
LP/J MGP_LPJ_G0035127
protein coding gene Chr9:108601650-108604199 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0035038
protein coding gene Chr9:116888225-116891723 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0035753
protein coding gene Chr9:107327377-107330042 (-)
PWK/PhJ MGP_PWKPhJ_G0033940
protein coding gene Chr9:104225007-104228233 (-)
SPRET/EiJ MGP_SPRETEiJ_G0033775
protein coding gene Chr9:107396309-107398762 (-)
WSB/EiJ MGP_WSBEiJ_G0034354
protein coding gene Chr9:107217518-107222939 (-)



Homology
more
  • Human Ortholog
    IQCF4P, IQ motif containing F4, pseudogene
  • Vertebrate Orthologs
    5
  • Human Ortholog
    IQCF4P, IQ motif containing F4, pseudogene
    Orthology source: HGNC
  • Synonyms
    IQCF4
  • Links
    NCBI Gene ID: 100506840

  • Chr Location
    chr3:51817603-51819635 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 67320 NCBI Gene Model | MGI Sequence Detail 2649 C57BL/6J ±  kb
transcript NM_026090 RefSeq | MGI Sequence Detail 863 Not Specified  
polypeptide NP_080366 RefSeq | MGI Sequence Detail 204 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR039887 IQ domain-containing protein F
    IPR000048 IQ motif, EF-hand binding site
    IPR027417 P-loop containing nucleoside triphosphate hydrolase
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 5
References
more
  • Summaries
    All 19
    Gene Ontology 1
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
02/18/2020
MGI 6.14
The Jackson Laboratory