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Rab3c Gene Detail
Summary
  • Symbol
    Rab3c
  • Name
    RAB3C, member RAS oncogene family
  • Synonyms
    2700062I01Rik, 3110015B08Rik, 3110037E15Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914545
    NCBI Gene: 67295
  • Gene Overview
    MyGene.info: RAB3C
Location & Maps
more
  • Sequence Map
    Chr13:110054187-110280206 bp, - strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      226020 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 61.19 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    RAB3C, RAB3C, member RAS oncogene family
  • Vertebrate Orthologs
    10
  • Human Ortholog
    RAB3C, RAB3C, member RAS oncogene family
    Orthology source: HGNC, HomoloGene
  • Links
    NCBI Gene ID: 115827
    neXtProt AC: NX_Q96E17

  • Chr Location
    5q13; chr5:58582127-58859394 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    14 phenotypes from multigenic genotypes
    7 phenotype references
  • All Mutations and Alleles
    5
  • Targeted
    5
Mice homozygous for a knock-out allele are viable and fertile.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000021700 Ensembl Gene Model | MGI Sequence Detail 226020 C57BL/6J ±  kb
transcript ENSMUST00000167824 Ensembl | MGI Sequence Detail 8500 Not Applicable  
polypeptide ENSMUSP00000132945 Ensembl | MGI Sequence Detail 227 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    1802 from dbSNP Build 142
Protein
Information
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  • UniProt
    4 Sequences
  • Protein Ontology
    PR:000013619 ras-related protein Rab-3C
  • InterPro Domains
    IPR027417 P-loop containing nucleoside triphosphate hydrolase
    IPR001806 Small GTPase superfamily
    IPR005225 Small GTP-binding protein domain
Molecular
Reagents
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  • All nucleic 33
    cDNA 32
    Primer pair 1

    Microarray probesets 4
Other
Accession IDs
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MGI:1920367, MGI:1924255, MGI:2145303
References
more
  • Summaries
    All 49
    Developmental Gene Expression 13
    Gene Ontology 9
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:217588 Perdigoto CN, et al., Embryonic maturation of epidermal Merkel cells is controlled by a redundant transcription factor network. Development. 2014 Dec;141(24):4690-6

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory