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Ccdc137
Gene Detail
Symbol

Name
ID
Ccdc137
coiled-coil domain containing 137
MGI:1914541
Synonyms
3110023B02Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 11
84.15 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr11:120458115-120464358 bp, + strand
From VEGA annotation of GRCm38

  6244 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:34992  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 2 western clawed frog; 1 zebrafish

HCOP human homology predictions: CCDC137
Gene Tree: Ccdc137

Human
homologs
CCDC137, coiled-coil domain containing 137
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 339230
neXtProt AC: NX_Q6PK04

Human Synonyms: RaRF

Human Chr (Location): 17q25.3; chr17:81666731-81673907 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
Interactions
Ccdc137 interacts with 242 markers (Mir15a, Mir15b, Mir16-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component nucleolus
Function poly(A) RNA binding
External Resources: FuncBase
Expression
cDNA source data(7)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: ZFIN ccdc137    NEW 
Molecular
reagents
All nucleic(7) cDNA(7)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000004186 (Evidence)
Ensembl Gene Model ENSMUSG00000049957 (Evidence)
Entrez Gene 67291 (Evidence)
DFCI TC1578716
NIA Mouse Gene Index U013661
Consensus CDS Project CCDS25736.1
International Mouse Phenotyping Consortium Status Ccdc137
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000004186 VEGA Gene Model | MGI Sequence Detail 6244 C57BL/6J ±  kb
transcript OTTMUST00000009495 VEGA | MGI Sequence Detail 2778 Not Applicable 
polypeptide OTTMUSP00000004618 VEGA | MGI Sequence Detail 290 Not Applicable 

For the selected sequences
All sequences(42) RefSeq(6) UniProt(3)
Polymorphisms
SNPs within 2kb(37 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR026680 Coiled-coil domain-containing protein 137
Protein Ontology PR:000029317 coiled-coil domain-containing protein 137
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(24)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory