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Srek1ip1 Gene Detail
Summary
  • Symbol
    Srek1ip1
  • Name
    splicing regulatory glutamine/lysine-rich protein 1interacting protein 1
  • Synonyms
    3110031B13Rik, Sfrs12ip1, Srsf12ip1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914538
    NCBI Gene: 67288
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:104817170-104838676 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 56.84 cM, cytoband D1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    141 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914538
protein coding gene Chr13:104792484-104839274 (+)
129S1/SvImJ MGP_129S1SvImJ_G0020910
protein coding gene Chr13:106904624-106954111 (+)
A/J MGP_AJ_G0020861
protein coding gene Chr13:102749422-102797414 (+)
AKR/J MGP_AKRJ_G0020836
protein coding gene Chr13:105870743-105918586 (+)
BALB/cJ MGP_BALBcJ_G0020861
protein coding gene Chr13:103454822-103503948 (+)
C3H/HeJ MGP_C3HHeJ_G0020650
protein coding gene Chr13:105618535-105669190 (+)
C57BL/6NJ MGP_C57BL6NJ_G0021295
protein coding gene Chr13:110123686-110175227 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0018865
protein coding gene Chr13:98332479-98380304 (+)
CAST/EiJ MGP_CASTEiJ_G0020169
protein coding gene Chr13:105140288-105164229 (+)
CBA/J MGP_CBAJ_G0020612
protein coding gene Chr13:114388795-114442548 (+)
DBA/2J MGP_DBA2J_G0020736
protein coding gene Chr13:102506798-102554440 (+)
FVB/NJ MGP_FVBNJ_G0020718
protein coding gene Chr13:101204583-101251743 (+)
LP/J MGP_LPJ_G0020810
protein coding gene Chr13:106936057-106989560 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0020746
protein coding gene Chr13:114675498-114700392 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0021334
protein coding gene Chr13:105343707-105392016 (+)
PWK/PhJ MGP_PWKPhJ_G0019922
protein coding gene Chr13:101242147-101291235 (+)
SPRET/EiJ MGP_SPRETEiJ_G0019744
protein coding gene Chr13:101554281-101604092 (+)
WSB/EiJ MGP_WSBEiJ_G0020227
protein coding gene Chr13:105818841-105870310 (+)



Homology
more
  • Human Ortholog
    SREK1IP1, SREK1 interacting protein 1
  • Human Ortholog
    SREK1IP1, SREK1 interacting protein 1
    Orthology source: HGNC
  • Synonyms
    P18SRP, SFRS12IP1
  • Links
    NCBI Gene ID: 285672
    neXtProt AC: NX_Q8N9Q2
    UniProt: Q8N9Q2

  • Chr Location
    5q12.3; chr5:64718148-64768849 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 67288 NCBI Gene Model | MGI Sequence Detail 21507 C57BL/6J ±  kb
transcript NR_135272 RefSeq | MGI Sequence Detail 1897 C57BL/6  
polypeptide Q4V9W2 UniProt | EBI | MGI Sequence Detail 153 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 21
    cDNA 20
    Primer pair 1

    Microarray probesets 6
Other
Accession IDs
less
MGI:2145253, MGI:2145400, MGI:2145414
References
more
  • Summaries
    All 35
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 9
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory