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Vstm2b Gene Detail
Summary
  • Symbol
    Vstm2b
  • Name
    V-set and transmembrane domain containing 2B
  • Synonyms
    2900093B09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914525
    NCBI Gene: 58188
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:40898342-40929972 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 27.88 cM, cytoband B2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    472 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914525
protein coding gene Chr7:40898328-40930594 (+)
129S1/SvImJ MGP_129S1SvImJ_G0032105
protein coding gene Chr7:40548381-40581304 (+)
A/J MGP_AJ_G0032085
protein coding gene Chr7:39611794-39643967 (+)
AKR/J MGP_AKRJ_G0032018
protein coding gene Chr7:40786513-40818749 (+)
BALB/cJ MGP_BALBcJ_G0032092
protein coding gene Chr7:39861556-39896306 (+)
C3H/HeJ MGP_C3HHeJ_G0031809
protein coding gene Chr7:41397710-41431024 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032570
protein coding gene Chr7:42544586-42576837 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029603
protein coding gene Chr7:40117749-40149450 (+)
CAST/EiJ MGP_CASTEiJ_G0031144
protein coding gene Chr7:32537940-32572398 (+)
CBA/J MGP_CBAJ_G0031777
protein coding gene Chr7:43878384-43911887 (+)
DBA/2J MGP_DBA2J_G0031929
protein coding gene Chr7:39530428-39564593 (+)
FVB/NJ MGP_FVBNJ_G0031882
protein coding gene Chr7:39267844-39300317 (+)
LP/J MGP_LPJ_G0032008
protein coding gene Chr7:40941288-40974466 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0031923
protein coding gene Chr7:42655616-42689495 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0032584
protein coding gene Chr7:40136561-40173024 (+)
PWK/PhJ MGP_PWKPhJ_G0030866
protein coding gene Chr7:32536293-32569612 (+)
SPRET/EiJ MGP_SPRETEiJ_G0030702
protein coding gene Chr7:28855345-28888658 (+)
WSB/EiJ MGP_WSBEiJ_G0031254
protein coding gene Chr7:40579296-40611728 (+)



Homology
more
  • Human Ortholog
    VSTM2B, V-set and transmembrane domain containing 2B
  • Vertebrate Orthologs
    8
  • Human Ortholog
    VSTM2B, V-set and transmembrane domain containing 2B
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 342865
    neXtProt AC: NX_A6NLU5
    UniProt: A6NLU5

  • Chr Location
    19q12; chr19:29525431-29564555 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 58188 NCBI Gene Model | MGI Sequence Detail 31631 C57BL/6J ±  kb
transcript NM_021387 RefSeq | MGI Sequence Detail 1455 C57BL/6  
polypeptide Q9JME9 UniProt | EBI | MGI Sequence Detail 285 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 3
Other
Accession IDs
less
MGI:1927557
References
more
  • Summaries
    All 25
    Developmental Gene Expression 2
    Gene Ontology 2
    Phenotypes 1
  • Earliest
    J:64911 Inoue S, et al., Growth suppression of Escherichia coli by induction of expression of mammalian genes with transmembrane or ATPase domains. Biochem Biophys Res Commun. 2000 Feb 16;268(2):553-61
  • Latest
    J:229257 Gu Z, et al., Expression of the immunoglobulin superfamily cell adhesion molecules in the developing spinal cord and dorsal root ganglion. PLoS One. 2015;10(3):e0121550

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/01/2019
MGI 6.14
The Jackson Laboratory