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Tbc1d19 Gene Detail
Summary
  • Symbol
    Tbc1d19
  • Name
    TBC1 domain family, member 19
  • Synonyms
    2810453K03Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914499
    NCBI Gene: 67249
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:53809606-53903965 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 29.65 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    247 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914499
protein coding gene Chr5:53809587-53909221 (+)
129S1/SvImJ MGP_129S1SvImJ_G0029556
protein coding gene Chr5:52896401-52991105 (+)
A/J MGP_AJ_G0029524
protein coding gene Chr5:51024561-51121651 (+)
AKR/J MGP_AKRJ_G0029472
protein coding gene Chr5:52776574-52872104 (+)
BALB/cJ MGP_BALBcJ_G0029533
protein coding gene Chr5:51504782-51599800 (+)
C3H/HeJ MGP_C3HHeJ_G0029256
protein coding gene Chr5:52937432-53032148 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029987
protein coding gene Chr5:55041042-55140588 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027227
protein coding gene Chr5:47744214-47836821 (+)
CAST/EiJ MGP_CASTEiJ_G0028664
protein coding gene Chr5:51926471-52017111 (+)
CBA/J MGP_CBAJ_G0029225
protein coding gene Chr5:56797158-56904789 (+)
DBA/2J MGP_DBA2J_G0029371
protein coding gene Chr5:51070060-51170225 (+)
FVB/NJ MGP_FVBNJ_G0029331
protein coding gene Chr5:50402567-50496524 (+)
LP/J MGP_LPJ_G0029456
protein coding gene Chr5:53327079-53421377 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029359
protein coding gene Chr5:57801493-57905849 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0030020
protein coding gene Chr5:52269716-52364666 (+)
PWK/PhJ MGP_PWKPhJ_G0028388
protein coding gene Chr5:50135639-50230150 (+)
SPRET/EiJ MGP_SPRETEiJ_G0028222
protein coding gene Chr5:51704610-51807260 (+)
WSB/EiJ MGP_WSBEiJ_G0028745
protein coding gene Chr5:52321397-52419022 (+)



Homology
more
  • Human Ortholog
    TBC1D19, TBC1 domain family member 19
  • Vertebrate Orthologs
    10
  • Human Ortholog
    TBC1D19, TBC1 domain family member 19
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 55296
    neXtProt AC: NX_Q8N5T2
    UniProt: Q8N5T2

  • Chr Location
    4p15.2; chr4:26583924-26858919 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    20 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000039178 Ensembl Gene Model | MGI Sequence Detail 94360 C57BL/6J ±  kb
transcript ENSMUST00000037337 Ensembl | MGI Sequence Detail 2273 Not Applicable  
polypeptide ENSMUSP00000040585 Ensembl | MGI Sequence Detail 526 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR000195 Rab-GTPase-TBC domain
    IPR035969 Rab-GTPase-TBC domain superfamily
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 3
References
more
  • Summaries
    All 36
    Developmental Gene Expression 1
    Phenotypes 20
  • Earliest
    J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/19/2019
MGI 6.13
The Jackson Laboratory