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Pdzk1ip1 Gene Detail
Summary
  • Symbol
    Pdzk1ip1
  • Name
    PDZK1 interacting protein 1
  • Synonyms
    0610007F13Rik, 2700030M23Rik, Map17
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914432
    NCBI Gene: 67182
  • Gene Overview
    MyGene.info: PDZK1IP1
  • Alliance
  • Transcription Start Sites
    11 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:115088708-115093894 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 52.75 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    55 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914432
protein coding gene Chr4:115088708-115093899 (.)
129S1/SvImJ MGP_129S1SvImJ_G0028595
protein coding gene Chr4:115857583-115862776 (+)
A/J MGP_AJ_G0028557
protein coding gene Chr4:111449707-111454897 (+)
AKR/J MGP_AKRJ_G0028505
protein coding gene Chr4:113744414-113749598 (+)
BALB/cJ MGP_BALBcJ_G0028577
protein coding gene Chr4:112076340-112081532 (+)
C3H/HeJ MGP_C3HHeJ_G0028291
protein coding gene Chr4:115362739-115367928 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029021
protein coding gene Chr4:120339813-120344997 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026305
protein coding gene Chr4:105520159-105537705 (+)
CAST/EiJ MGP_CASTEiJ_G0027728
protein coding gene Chr4:112781297-112786511 (+)
CBA/J MGP_CBAJ_G0028259
protein coding gene Chr4:123460870-123466072 (+)
DBA/2J MGP_DBA2J_G0028408
protein coding gene Chr4:112079812-112085002 (+)
FVB/NJ MGP_FVBNJ_G0028376
protein coding gene Chr4:110552528-110557724 (+)
LP/J MGP_LPJ_G0028509
protein coding gene Chr4:116066112-116071301 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028401
protein coding gene Chr4:128597253-128602454 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029057
protein coding gene Chr4:114991833-114997022 (+)
PWK/PhJ MGP_PWKPhJ_G0027453
protein coding gene Chr4:108876639-108881828 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027277
protein coding gene Chr4:111390004-111395223 (+)
WSB/EiJ MGP_WSBEiJ_G0027806
protein coding gene Chr4:114773043-114778405 (+)



Homology
more
  • Human Ortholog
    PDZK1IP1, PDZK1 interacting protein 1
  • Vertebrate Orthologs
    7
  • Human Ortholog
    PDZK1IP1, PDZK1 interacting protein 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    DD96, MAP17, SPAP
  • Links
    NCBI Gene ID: 10158
    neXtProt AC: NX_Q13113
    UniProt: Q13113

  • Chr Location
    1p33; chr1:47183589-47190099 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    6
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Targeted
    3
  • Genomic Mutations
    4 involving Pdzk1ip1
  • Incidental Mutations
    APF , CvDC
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 67182 NCBI Gene Model | MGI Sequence Detail 5187 C57BL/6J ±  kb
transcript NM_001164557 RefSeq | MGI Sequence Detail 1129 C57BL/6  
polypeptide Q9CQH0 UniProt | EBI | MGI Sequence Detail 114 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR026628 PDZK1-interacting protein 1
    IPR031627 PDZK1-interacting protein 1/SMIM24
Molecular
Reagents
less
  • All nucleic 75
    cDNA 74
    Other 1

    Microarray probesets 4
Other
Accession IDs
less
MGI:1918913, MGI:2140501
References
more
  • Summaries
    All 35
    Developmental Gene Expression 3
    Gene Ontology 2
    Phenotypes 8
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory