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Ccdc25 Gene Detail
Summary
  • Symbol
    Ccdc25
  • Name
    coiled-coil domain containing 25
  • Synonyms
    2610528H13Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914429
    NCBI Gene: 67179
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:65837302-65866604 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 14, 34.36 cM, cytoband D1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    151 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914429
protein coding gene Chr14:65837302-65866607 (+)
129S1/SvImJ MGP_129S1SvImJ_G0021486
protein coding gene Chr14:60472698-60505236 (+)
A/J MGP_AJ_G0021445
protein coding gene Chr14:59059030-59088041 (+)
AKR/J MGP_AKRJ_G0021421
protein coding gene Chr14:61109545-61141862 (+)
BALB/cJ MGP_BALBcJ_G0021451
protein coding gene Chr14:59003331-59032459 (+)
C3H/HeJ MGP_C3HHeJ_G0021228
protein coding gene Chr14:60765332-60808841 (+)
C57BL/6NJ MGP_C57BL6NJ_G0021890
protein coding gene Chr14:63263004-63298639 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0019430
protein coding gene Chr14:56986486-57016308 (+)
CAST/EiJ MGP_CASTEiJ_G0020745
protein coding gene Chr14:57261759-57291910 (+)
CBA/J MGP_CBAJ_G0021195
protein coding gene Chr14:65182915-65215408 (+)
DBA/2J MGP_DBA2J_G0021318
protein coding gene Chr14:58708663-58738238 (+)
FVB/NJ MGP_FVBNJ_G0021297
protein coding gene Chr14:58117582-58147127 (+)
LP/J MGP_LPJ_G0021393
protein coding gene Chr14:61515302-61546691 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0021326
protein coding gene Chr14:64257704-64287110 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0021913
protein coding gene Chr14:60311962-60343505 (+)
PWK/PhJ MGP_PWKPhJ_G0020489
protein coding gene Chr14:55433187-55462621 (+)
SPRET/EiJ MGP_SPRETEiJ_G0020322
protein coding gene Chr14:56281242-56311915 (+)
WSB/EiJ MGP_WSBEiJ_G0020798
protein coding gene Chr14:60603153-60635740 (+)



Homology
more
  • Human Ortholog
    CCDC25, coiled-coil domain containing 25
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CCDC25, coiled-coil domain containing 25
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 55246
    neXtProt AC: NX_Q86WR0
    UniProt: Q86WR0

  • Chr Location
    8p21.1; chr8:27733316-27772656 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    10 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 67179 NCBI Gene Model | MGI Sequence Detail 29303 C57BL/6J ±  kb
transcript NM_145944 RefSeq | MGI Sequence Detail 2227 C57BL/6  
polypeptide Q78PG9 UniProt | EBI | MGI Sequence Detail 208 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 26
    cDNA 26

    Microarray probesets 2
References
more
  • Summaries
    All 28
    Phenotypes 10
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/23/2020
MGI 6.15
The Jackson Laboratory