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Lpar6
Gene Detail
Symbol

Name
ID
Lpar6
lysophosphatidic acid receptor 6
MGI:1914418
Synonyms
2610302I02Rik, P2ry5, P2y5
Feature Type
protein coding gene
Genetic Map
Chromosome 14
38.75 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr14:73237895-73243294 bp, + strand
From VEGA annotation of GRCm38

  5400 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:55925  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Protein SuperFamily: LPAR4-like receptor
Gene Tree: Lpar6

Human
homologs
Human Homolog LPAR6, lysophosphatidic acid receptor 6
NCBI Gene ID 10161
neXtProt AC  NX_P43657
Human Synonyms  ARWH1, HYPT8, LAH3, P2RY5, P2Y5
Human Chr (Location)  13q14; chr13:48411045-48444704 (-)  GRCh38
Disease Associations  (1) Diseases Associated with Human LPAR6
Mutations,
alleles, and
phenotypes
All mutations/alleles(16) : Gene trapped(10) Targeted(6)
Incidental mutations (data from APF )
Interactions
Lpar6 interacts with 166 markers (Mir1b, Mir17, Mir19a, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (2 records)
Data Summary: Results (2)    Tissues (2)    Tissue x Stage Matrix (view)
Assay TypeResults
RT-PCR 2
cDNA source data(54)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(55) cDNA(54) Primer pair(1)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000036134 (Evidence)
Ensembl Gene ModelENSMUSG00000033446 (Evidence)
Entrez Gene67168 (Evidence)
UniGene390681
DFCITC1578332
DoTSDT.527426
NIA Mouse Gene IndexU015842
Consensus CDS ProjectCCDS27268.1
International Mouse Knockout Project StatusLpar6
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000036134 VEGA Gene Model | MGI Sequence Detail 5400 C57BL/6J ±  kb
transcript OTTMUST00000092880 VEGA | MGI Sequence Detail 5400 Not Applicable 
polypeptide OTTMUSP00000051426 VEGA | MGI Sequence Detail 344 Not Applicable 

For the selected sequences
All sequences(25) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(89 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR017452 GPCR, rhodopsin-like, 7TM
InterPro IPR000276 G protein-coupled receptor, rhodopsin-like
Protein Ontology PR:000001632 oleoyl-L-alpha-lysophosphatidic acid receptor
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:196844 Furuta D, et al., Lysophosphatidic acid induces neurite branch formation through LPA3. Mol Cell Neurosci. 2012 May;50(1):21-34
All references(36)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory