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Lpar6
Gene Detail
Symbol

Name
ID
Lpar6
lysophosphatidic acid receptor 6
MGI:1914418
Synonyms
2610302I02Rik, P2ry5, P2y5
Feature Type
protein coding gene
Genetic Map
Chromosome 14
38.75 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr14:73237895-73243294 bp, + strand
From VEGA annotation of GRCm38

  5400 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:55925  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: LPAR6
Protein SuperFamily: LPAR4-like receptor
Gene Tree: Lpar6

Human
homologs
LPAR6, lysophosphatidic acid receptor 6
Orthology source: HomoloGene, HGNC

IDs:
NCBI Gene ID: 10161
neXtProt AC: NX_P43657

Human Synonyms: ARWH1, HYPT8, LAH3, P2RY5, P2Y5

Human Chr (Location): 13q14; chr13:48411045-48444704 (-)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human LPAR6

Mutations,
alleles, and
phenotypes
All mutations/alleles(16) : Gene trapped(10) Targeted(6)
Incidental mutations (data from APF , CvDC )
Interactions
Lpar6 interacts with 165 markers (Mir1b, Mir17, Mir19a, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (2 records)
Data Summary: Results (2)    Tissues (2)    Tissue x Stage Matrix (view)
Assay TypeResults
RT-PCR 2
cDNA source data(54)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase lpar6    NEW 
Molecular
reagents
All nucleic(55) cDNA(54) Primer pair(1)
Microarray probesets(4)
Other database
links
VEGA Gene Model OTTMUSG00000036134 (Evidence)
Ensembl Gene Model ENSMUSG00000033446 (Evidence)
Entrez Gene 67168 (Evidence)
UniGene 390681
DFCI TC1578332
DoTS DT.527426
NIA Mouse Gene Index U015842
Consensus CDS Project CCDS27268.1
International Mouse Phenotyping Consortium Status Lpar6
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000036134 VEGA Gene Model | MGI Sequence Detail 5400 C57BL/6J ±  kb
transcript OTTMUST00000092880 VEGA | MGI Sequence Detail 5400 Not Applicable 
polypeptide OTTMUSP00000051426 VEGA | MGI Sequence Detail 344 Not Applicable 

For the selected sequences
All sequences(25) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(89 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR017452 GPCR, rhodopsin-like, 7TM
InterPro IPR000276 G protein-coupled receptor, rhodopsin-like
Protein Ontology PR:000001632 oleoyl-L-alpha-lysophosphatidic acid receptor
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:196844 Furuta D, et al., Lysophosphatidic acid induces neurite branch formation through LPA3. Mol Cell Neurosci. 2012 May;50(1):21-34
All references(35)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
05/20/2015
MGI 5.22
The Jackson Laboratory