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Sft2d3 Gene Detail
Summary
  • Symbol
    Sft2d3
  • Name
    SFT2 domain containing 3
  • Synonyms
    2610206C24Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914408
    NCBI Gene: 67158
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr18:31909098-31911824 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 18, 17.88 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    9 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914408
protein coding gene Chr18:31909094-31911903 (-)
129S1/SvImJ MGP_129S1SvImJ_G0024219
protein coding gene Chr18:30037401-30040212 (-)
A/J MGP_AJ_G0024185
protein coding gene Chr18:29036192-29039003 (-)
AKR/J MGP_AKRJ_G0024154
protein coding gene Chr18:29837243-29840051 (-)
BALB/cJ MGP_BALBcJ_G0024185
protein coding gene Chr18:29128853-29131660 (-)
C3H/HeJ MGP_C3HHeJ_G0023953
protein coding gene Chr18:29877012-29879819 (-)
C57BL/6NJ MGP_C57BL6NJ_G0024627
protein coding gene Chr18:31099402-31102211 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0022068
protein coding gene Chr18:29263015-29265792 (-)
CAST/EiJ MGP_CASTEiJ_G0023428
protein coding gene Chr18:29770726-29773549 (-)
CBA/J MGP_CBAJ_G0023921
protein coding gene Chr18:32063801-32066613 (-)
DBA/2J MGP_DBA2J_G0024053
protein coding gene Chr18:28710503-28713314 (-)
FVB/NJ MGP_FVBNJ_G0024019
protein coding gene Chr18:28413109-28415916 (-)
LP/J MGP_LPJ_G0024134
protein coding gene Chr18:30116629-30119440 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0024047
protein coding gene Chr18:33411956-33414767 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0024675
protein coding gene Chr18:29704118-29706929 (-)
PWK/PhJ MGP_PWKPhJ_G0023171
protein coding gene Chr18:28866508-28869307 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022980
protein coding gene Chr18:29932573-29935384 (-)
WSB/EiJ MGP_WSBEiJ_G0023491
protein coding gene Chr18:29606362-29609172 (-)



Homology
more
  • Human Ortholog
    SFT2D3, SFT2 domain containing 3
  • Vertebrate Orthologs
    7
  • Human Ortholog
    SFT2D3, SFT2 domain containing 3
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 84826
    neXtProt AC: NX_Q587I9
    UniProt: Q587I9

  • Chr Location
    2q14.3; chr2:127701023-127703833 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000044982 Ensembl Gene Model | MGI Sequence Detail 2727 C57BL/6J ±  kb
transcript ENSMUST00000054984 Ensembl | MGI Sequence Detail 2727 Not Applicable  
polypeptide ENSMUSP00000100656 Ensembl | MGI Sequence Detail 212 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR007305 Vesicle transport protein, Got1/SFT2-like
    IPR011691 Vesicle transport protein SFT2
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 4
Other
Accession IDs
less
MGI:2147271, MGI:2147339
References
more
  • Summaries
    All 19
    Gene Ontology 2
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/19/2019
MGI 6.13
The Jackson Laboratory