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Smim10l1 Gene Detail
Summary
  • Symbol
    Smim10l1
  • Name
    small integral membrane protein 10 like 1
  • Synonyms
    2700089E24Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914379
    NCBI Gene: 381820
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:133104909-133110899 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 64.03 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    146 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914379
protein coding gene Chr6:133099149-133112089 (+)
129S1/SvImJ MGP_129S1SvImJ_G0031399
protein coding gene Chr6:137272908-137279670 (+)
A/J MGP_AJ_G0031375
protein coding gene Chr6:131824049-131832326 (+)
AKR/J MGP_AKRJ_G0031302
protein coding gene Chr6:135723183-135729827 (+)
BALB/cJ MGP_BALBcJ_G0031381
protein coding gene Chr6:131442124-131448482 (+)
C3H/HeJ MGP_C3HHeJ_G0031103
protein coding gene Chr6:135889583-135897407 (+)
C57BL/6NJ MGP_C57BL6NJ_G0031841
protein coding gene Chr6:140956704-140962776 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0028973
protein coding gene Chr6:130103612-130109658 (+)
CAST/EiJ MGP_CASTEiJ_G0030473
protein coding gene Chr6:135541481-135551905 (+)
CBA/J MGP_CBAJ_G0031062
protein coding gene Chr6:146216320-146225454 (+)
DBA/2J MGP_DBA2J_G0031220
protein coding gene Chr6:130671290-130676830 (+)
FVB/NJ MGP_FVBNJ_G0031170
protein coding gene Chr6:129673649-129679009 (+)
LP/J MGP_LPJ_G0031304
protein coding gene Chr6:137366539-137373176 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0031210
protein coding gene Chr6:150327191-150335369 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0031875
protein coding gene Chr6:135679251-135684726 (+)
PWK/PhJ MGP_PWKPhJ_G0030197
protein coding gene Chr6:129096463-129102583 (+)
SPRET/EiJ MGP_SPRETEiJ_G0030021
protein coding gene Chr6:134069774-134075947 (+)
WSB/EiJ MGP_WSBEiJ_G0030563
protein coding gene Chr6:136272418-136279423 (+)



Homology
more
  • Human Ortholog
    SMIM10L1, small integral membrane protein 10 like 1
  • Vertebrate Orthologs
    5
  • Human Ortholog
    SMIM10L1, small integral membrane protein 10 like 1
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 100129361
    neXtProt AC: NX_P0DMW3
    UniProt: P0DMW3

  • Chr Location
    12p13.2; chr12:11171181-11176020 (+)  GRCh38.p7

Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000072704 Ensembl Gene Model | MGI Sequence Detail 5991 C57BL/6J ±  kb
transcript ENSMUST00000191462 Ensembl | MGI Sequence Detail 574 Not Applicable  
polypeptide ENSMUSP00000139452 Ensembl | MGI Sequence Detail 89 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    5 Sequences
  • InterPro Domains
    IPR029367 Small integral membrane protein 10
Molecular
Reagents
less
  • All nucleic 59
    cDNA 59

    Microarray probesets 6
Other
Accession IDs
less
MGI:2141464
References
more
  • Summaries
    All 21
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory