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Lce1a1 Gene Detail
Summary
  • Symbol
    Lce1a1
  • Name
    late cornified envelope 1A1
  • Synonyms
    2200008B06Rik, Sprrl3
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914377
    NCBI Gene: 67127
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:92646535-92648307 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 40.14 cM, cytoband F2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    28 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914377
protein coding gene Chr3:92646532-92648307 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027506
protein coding gene Chr3:93101759-93104255 (-)
A/J MGP_AJ_G0027473
protein coding gene Chr3:90172614-90174231 (-)
AKR/J MGP_AKRJ_G0027438
protein coding gene Chr3:92289130-92290862 (-)
BALB/cJ MGP_BALBcJ_G0027481
protein coding gene Chr3:89982741-89984470 (-)
C3H/HeJ MGP_C3HHeJ_G0027221
protein coding gene Chr3:92510857-92512597 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027925
protein coding gene Chr3:96648028-96650049 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0025275
protein coding gene Chr3:86802099-86803912 (-)
CAST/EiJ MGP_CASTEiJ_G0026669
protein coding gene Chr3:91922982-91926159 (-)
CBA/J MGP_CBAJ_G0027195
protein coding gene Chr3:99966479-99968220 (-)
DBA/2J MGP_DBA2J_G0027333
protein coding gene Chr3:89494693-89496719 (-)
FVB/NJ MGP_FVBNJ_G0027301
protein coding gene Chr3:87662867-87664639 (-)
LP/J MGP_LPJ_G0027441
protein coding gene Chr3:94321423-94324247 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027326
protein coding gene Chr3:106245973-106247740 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027984
protein coding gene Chr3:92017930-92019671 (-)
PWK/PhJ MGP_PWKPhJ_G0026402
protein coding gene Chr3:89374951-89376772 (-)
SPRET/EiJ MGP_SPRETEiJ_G0026220
protein coding gene Chr3:90347551-90349675 (-)
WSB/EiJ MGP_WSBEiJ_G0026751
protein coding gene Chr3:92398103-92403794 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    2 involving Lce1a1
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000057609 Ensembl Gene Model | MGI Sequence Detail 1773 C57BL/6J ±  kb
transcript ENSMUST00000074142 Ensembl | MGI Sequence Detail 705 Not Applicable  
polypeptide ENSMUSP00000073776 Ensembl | MGI Sequence Detail 143 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR028205 Late cornified envelope protein
    IPR026075 Small proline-rich protein/late cornified envelope protein
Molecular
Reagents
less
  • All nucleic 16
    cDNA 16

    Microarray probesets 5
References
more
  • Summaries
    All 23
    Developmental Gene Expression 2
    Diseases 1
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:235073 Miyai M, et al., Transcription Factor MafB Coordinates Epidermal Keratinocyte Differentiation. J Invest Dermatol. 2016 Sep;136(9):1848-57

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/01/2019
MGI 6.14
The Jackson Laboratory