1700024G13Rik Gene Detail

Summary

• Symbol
  1700024G13Rik
• Name
  RIKEN cDNA 1700024G13 gene

• Feature Type
  protein coding gene
• IDs
  MGI:1914335
  NCBI Gene: 67085

Location & Maps

• Sequence Map
  Chr14:32376502-32388373 bp, - strand
• From NCBI annotation of GRCm38
  

  Mouse Genome Browser
  
  

• Download
  Sequence
    11872 bp   ±  kb flank
  
  
• Genome Browsers
  VEGA | Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 19.40 cM
• Mapping Data
  1 experiment

Homology

• Human Ortholog
  C10orf53, chromosome 10 open reading frame 53

• Vertebrate Orthologs
  8

• Human Ortholog
  C10orf53, chromosome 10 open reading frame 53
  Orthology source: HomoloGene, HGNC
• Links
  HGNC:27421

  NCBI Gene ID: 282966

  neXtProt AC: NX_Q8N6V4

  UniProt: Q8N6V4

  
  
• Chr Location
  10q11.23; chr10:49679638-49708910 (+)  GRCh38.p7

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• HomoloGene
  Vertebrate Homology Class 28053
  1 human;1 mouse;1 rat;1 cattle;1 dog;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  
• HCOP
  human homology predictions: C10orf53
• Gene Tree
  1700024G13Rik
  

Gene Ontology
(GO)
Classifications

• External Resources
  FuncBase

Expression

• cDNA Data
  10
• Literature Summary
  1

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas
• Other Vertebrate Links
  Xenbase c10orf53

Interactions

• 1700024G13Rik interacts with 10 markers (Mir138-1, Mir138-2, Mir151, ...) View All

Sequences &
Gene Models

• All Sequences
  12
• RefSeq
  2
• UniProt
  1
• CCDS
  CCDS36867.1
• UniGene
  109099

• Ensembl
  ENSMUSG00000072473 (Evidence)
• NCBI Gene
  67085

Representative Sequences			Length	Strain/Species
genomic	67085	NCBI Gene Model | MGI Sequence Detail	11872	C57BL/6J
transcript	NM_001034037	RefSeq | MGI Sequence Detail	399	Not Specified
polypeptide	Q3KNL4	UniProt | EBI | MGI Sequence Detail	93	Not Applicable

Polymorphisms

• SNPs within 2kb
  79 from dbSNP Build 142

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR027885 Uncharacterised protein family UPF0728

Molecular
Reagents

• All nucleic 10

  cDNA 10

  
  

  Microarray probesets 1

References

• Summaries
  All 15

  Developmental Gene Expression 1
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:240319 Stauber M, et al., Identification of FOXJ1 effectors during ciliogenesis in the foetal respiratory epithelium and embryonic left-right organiser of the mouse. Dev Biol. 2017 Mar 15;423(2):170-188