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ccdc198 Gene Detail
Summary
  • Symbol
    ccdc198
  • Name
    coiled-coil domain containing 198
  • Synonyms
    1700011H14Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914332
    NCBI Gene: 67082
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:49226358-49246326 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 14, 25.46 cM, cytoband C1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    215 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914332
protein coding gene Chr14:49219588-49246326 (-)
129S1/SvImJ MGP_129S1SvImJ_G0021231
protein coding gene Chr14:43126101-43150316 (-)
A/J MGP_AJ_G0021180
protein coding gene Chr14:41760376-41783341 (-)
AKR/J MGP_AKRJ_G0021158
protein coding gene Chr14:43391626-43417537 (-)
BALB/cJ MGP_BALBcJ_G0021183
protein coding gene Chr14:41819882-41844915 (-)
C3H/HeJ MGP_C3HHeJ_G0020966
protein coding gene Chr14:43175786-43198858 (-)
C57BL/6NJ MGP_C57BL6NJ_G0021618
protein coding gene Chr14:44894693-44913767 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0019177
protein coding gene Chr14:41059334-41082640 (-)
CAST/EiJ MGP_CASTEiJ_G0020492
protein coding gene Chr14:40303059-40329972 (-)
CBA/J MGP_CBAJ_G0020933
protein coding gene Chr14:46321166-46346069 (-)
DBA/2J MGP_DBA2J_G0021056
protein coding gene Chr14:41635383-41658283 (-)
FVB/NJ MGP_FVBNJ_G0021041
protein coding gene Chr14:41378987-41401810 (-)
LP/J MGP_LPJ_G0021125
protein coding gene Chr14:43382282-43405195 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0021066
protein coding gene Chr14:45647233-45670276 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0021651
protein coding gene Chr14:42921066-42944045 (-)
PWK/PhJ MGP_PWKPhJ_G0020240
protein coding gene Chr14:38546280-38569605 (-)
SPRET/EiJ MGP_SPRETEiJ_G0020065
protein coding gene Chr14:39038124-39058131 (-)
WSB/EiJ MGP_WSBEiJ_G0020548
protein coding gene Chr14:43021142-43052959 (-)



Homology
more
  • Human Ortholog
    CCDC198, coiled-coil domain containing 198
  • Vertebrate Orthologs
    9
  • Human Ortholog
    CCDC198, coiled-coil domain containing 198
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C14orf105
  • Links
    NCBI Gene ID: 55195
    neXtProt AC: NX_Q9NVL8
    UniProt: Q9NVL8

  • Chr Location
    14q22.3; chr14:57469300-57493980 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Targeted
    2
  • Genomic Mutations
    1 involving ccdc198
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 67082 NCBI Gene Model | MGI Sequence Detail 19969 C57BL/6J ±  kb
transcript NM_025956 RefSeq | MGI Sequence Detail 1167 C57BL/6  
polypeptide Q9CPZ1 UniProt | EBI | MGI Sequence Detail 294 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    5 Sequences
  • InterPro Domains
    IPR029235 Protein of unknown function DUF4619
Molecular
Reagents
less
  • All nucleic 29
    cDNA 28
    Primer pair 1

    Microarray probesets 2
References
more
  • Summaries
    All 25
    Developmental Gene Expression 5
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory