Yaf2
Gene Detail

Symbol Name ID

Yaf2 YY1 associated factor 2 MGI:1914307

Synonyms

2810021M11Rik

Feature Type

protein coding gene

Genetic Map

Chromosome 15

47.39 cM, cytoband F1
Detailed Genetic Map ± 1 cM


Mapping data(3)

Sequence Map

Chr15:93284278-93336935 bp, - strand From VEGA annotation of GRCm38   52658 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:4203  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Yaf2

Human homologs

Human Homolog		YAF2, YY1 associated factor 2
NCBI Gene ID		10138
neXtProt AC		NX_Q8IY57
Human Chr (Location)		12q12; chr12:42550906-42632154 (-)  GRCh37.p10

Alleles and phenotypes

All alleles(1) : Gene trapped(1)

Gene Ontology (GO) classifications

All GO classifications: (13 annotations)

Process	negative regulation of transcription, DNA-dependent, positive regulation of transcription, DNA-dependent, ...
Component	cytoplasm, nucleus
Function	metal ion binding, protein binding, ...

External Resources: FuncBase

Expression

Literature Summary: (6 records)
Data Summary: Results (104)    Tissues (60)    Images (21)
Theiler Stages: 2, 4, 5, 9, 11, 13, 15, 16, 17, 19, 21, 23, 28

Assay Type	Results
RNA in situ	95
RT-PCR	9

cDNA source data(54)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(56) cDNA(54) Primer pair(2)
Microarray probesets(4)

Other database links

VEGA Gene Model	OTTMUSG00000017284 (Evidence)
Ensembl Gene Model	ENSMUSG00000022634 (Evidence)
Entrez Gene	67057 (Evidence)
UniGene	4714
DFCI	TC1578782, TC1588020
DoTS	DT.97363391, DT.97377650
NIA Mouse Gene Index	U036562
Consensus CDS Project	CCDS27765.1
International Mouse Knockout Project Status	Yaf2

Sequences

Length	Strain/Species
genomic	OTTMUSG00000017284	VEGA Gene Model | MGI Sequence Detail	52658	C57BL/6J
transcript	OTTMUST00000041894	VEGA | MGI Sequence Detail	1676	Not Applicable
polypeptide	OTTMUSP00000018841	VEGA | MGI Sequence Detail	179	Not Applicable

All sequences(33) RefSeq(3) UniProt(1)

Polymorphisms

SNPs(187 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR001876	Zinc finger, RanBP2-type
Protein Ontology	PR:000017521	YY1-associated factor 2

References

(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:192806 Solca C, et al., Dietary xenosterols lead to infertility and loss of abdominal adipose tissue in sterolin-deficient mice. J Lipid Res. 2013 Feb;54(2):397-409
All references(37)